Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4173 |
Symbol | |
ID | 6118524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5075520 |
End bp | 5076839 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635735 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001762524 |
Protein GI | 170728498 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA TAGCGTCGTT TTTACAATTT TTTCTATTGT CGGTGACCTT GTGCTCATCT TTCTTTGTCC ATAGTGCTAA TAAACTGGAT GGAGTGAGAA TTTGGGCTGC ACCTGAGTCG ACTCGAGTCG TTTTTGACCT GAATAAGGCT CCTGATTTCA GTTATTTCAC GTTAACTGGT CCCTATCGAC TTGTTGTTGA CCTGAAGGGG ACCTCCACCT CAGTTAATCT CAGCAAACTT GCAAATAATA GTAAATTAGT CAAAAGAGTT CGCATTAGTA AGCCACCCTC GAAGGGCACT TTAAGGCTGG TTATTGATCT GACAAAGCCT GTTAAATCAA ACCTGTTTTC TCTGCCTCCA ACGGCCCCTT ATGGTAATAG GTTAGTTGTT GATCTTGATG ATAGCGGCTC AAAGAAGGTA GTTCAGACTA GTCAGCCTAA AGCCAAGCTC AGAGATGTAG TGGTTGCCAT TGATGCGGGT CATGGTGGTG ATGATCCTGG ATCAATTGGA CCTTCGGGAA TTTATGAGAA AAAAGTGGTG TTAGAGATCG CTAAGAAGGT CGAGGCGAAA ATCAATGCTA CGCCGGGTAT GAGGGCTGTA ATGACGCGTA CCGGAGATTA CTTCGTTAAT CTTAATAAAC GTTCTGAAAT CGCCCGTACC AGTAAAGCCG ATCTACTTGT GTCTATTCAC GCGGATGCCT TCACTTCGCC TCAACCTAGA GGAGCTTCTG TGTGGGTTTT GTCTATGAGG CGTGCTAACA GTGAGATCGG TCGTTGGCTT GAGCATAAAG AGAAGCATTC AGAGTTGCTT GGTGGCGCAG GTGAGATAAT CCAGAATACG GATAACGAGC AATATTTAGC GATGACGCTG CTCGACATGT CCATGGATCG CTCTATGGCG ATCAGCCACA ATATTGCTGA TGATGTACTG TCAAATTTAG GAAGAGTGAC CAAGTTGCAT AAACATAAGC CGGAGTCGGC GAGTTTTGCG GTATTGAAAT CTCCTGATAT TCCCTCAATT TTGGTCGAAA CAGGATTTAT TTCGAACCAC AAAGAGGAGC GGTTACTCTC GCAGCGAGAG CATCAAAATA ATATTGCTAA GGCGGTACAT AAAGGTGTGC TGAAATATTT TGAGGCTAAC CCGCCGGTTA ACTCCTTGAT GGCCAGTAAG GGTTCGTTTA AGCATAATGT CCGTAAAGGT GAGTCACTAT CTGTGATAGC GCATAAATAT CAAGTGTCGA TTGCCAGTAT AAAACGGGCT AATGGCTTAA AATCTAATAC CTTAAGAATA GGCCAAAAGT TGGTTATTCC TAGGGCGTAG
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Protein sequence | MIKIASFLQF FLLSVTLCSS FFVHSANKLD GVRIWAAPES TRVVFDLNKA PDFSYFTLTG PYRLVVDLKG TSTSVNLSKL ANNSKLVKRV RISKPPSKGT LRLVIDLTKP VKSNLFSLPP TAPYGNRLVV DLDDSGSKKV VQTSQPKAKL RDVVVAIDAG HGGDDPGSIG PSGIYEKKVV LEIAKKVEAK INATPGMRAV MTRTGDYFVN LNKRSEIART SKADLLVSIH ADAFTSPQPR GASVWVLSMR RANSEIGRWL EHKEKHSELL GGAGEIIQNT DNEQYLAMTL LDMSMDRSMA ISHNIADDVL SNLGRVTKLH KHKPESASFA VLKSPDIPSI LVETGFISNH KEERLLSQRE HQNNIAKAVH KGVLKYFEAN PPVNSLMASK GSFKHNVRKG ESLSVIAHKY QVSIASIKRA NGLKSNTLRI GQKLVIPRA
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