Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4172 |
Symbol | mutL |
ID | 6118523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5073614 |
End bp | 5075458 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635734 |
Product | DNA mismatch repair protein |
Protein accession | YP_001762523 |
Protein GI | 170728497 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATAC AGATACTGTC ACCACAATTG GCAAACCAGA TCGCTGCTGG GGAGGTTGTC GAGCGACCCG CTTCGGTGAT TAAAGAGTTG GTTGAAAATA GCCTAGACGC TGGGGCTACC CGTGTCGATA TTGAGATCGA TAAGGGTGGC AGTAAGCTAA TAAAAATCCA AGACAATGGC TCTGGGATCC CTAAGTCAGA ACTGAATTTA GCGCTATCAA GGCATGCAAC TTCAAAGTTG AGTACTTTAG ATGACTTAGA TGCAATTTTA AGTTTTGGTT TTCGTGGCGA GGCATTAGCG AGTATCAGTT CGGTTTCTCG TTTGACTTTG ACCTCTCGAA CAGCAGAGCA AACTGAAGCT TGGCAAGCTT ATGCCGAAGG TTCAGATATG GCTGTGAAAG TGATCCCTGC CGCTCATCCT GTCGGAACGA CGATAGAAGC GGTTGATCTA TTTTTTAATA CTCCAGCCAG AAGGCGATTT CTCAAAAGTG ATAAAACAGA GTTTACCCAT ATTGATGAAT GGCTTAAACG TATTGCTTTA GTTAAACCTG AGATCCATTT CACCTTAAAA CACAATGGTA AGCAGGTTCG TAACTATCGT CCTGCAAATA ATCAAGATCA ATACTTGATG CGTTTAGCAC AGATCTGCGG CAAAAACTTT GCTGAGCAAG CCATTGAGAT AGATTGTCAA CATGAAGGCT TAACGTTAAG TGGCTATATA CAATCCCCAT TTTTTACCTC TCCAGCTAGC GACACACAAT TTTTCTACGT CAACGGTAGG TTAATTCGTG ACAGATTAGT GAATCATGCG GTGAGACAGG CATTTTCGGA ACATGGAACA GGGGAGTTAG CTAGCTATGT GCTGATGTTA GAGATTGCTC CTCATCAGGT TGATGTTAAT GTTCACCCAG CAAAGCACGA GGTGAGGTTC CACCAAAGCC GTTATGTACA TGATTACATA CTCCAGGCTT TACAGTCTGC ATTGATGCAG GTAGCTAGAG CCTCAATCTC TCTTCCAGAA GAGAAGCTGG TCGAGTTTGT CGAAGATGAT TGGCATAGTA AGCCTTTATC AACTGGGCGT GTTAGCGAAG CCGATCCATC AAACTACGCA ACACAGTCTA AGTTTGATGA AAAGCCAAGA GAGAGTGGTT CACAGGGGCA ATCGAGTTCA ATTTCTGCTC CATCATCCTA CTCAAGGGGC GGGGAGTATA GCGCCCGTTC TCAGCCTGAA CTGCCTTCGG CGAGTGAGAT AGCCTCTTAT ACTCAACTAT TAAAAACACC TCAGACGGCA CAAGCATCTA AATTAGTTAA TAGTGACTTA AAGACTCCTA TGCCGCCAGT GTTAGCAGGC CAATATTGGG TCTATGCTGG TGATGAGCTT TCTTTGCTGC CGATTGATAT CGTCGCAAAG TGGCTCGTGA AGCGTGATAT TTTAGCAAAA ATTGATAATG GTTTAGTCAG CCAGCCTCTC CTTATGCCTG TTTCAATAAA GGTTGATGAA GATTGGCTCA ATACTATCGA TGAGAGGGAG CAACTGTTAA GGCAATTAGG GATTGAGATA ACTATTCGTC TTGGGCAGTT GATTATAAAG AAAGTGCCCC CATATTTAAG ACAGAGCCAG TTAGTTACTG TTATTCCTGA ATTGTTGCAA TGGGTAAGGT TTGAAGAGCC GACCCATGAA GCGCTAGCGT TGTGGTTAGC AAAGCAAGAT GATGGAAAGT TTGAATCTGC AGTAGCAACT TGGTCAGCAT TTAGTCAGTT GGATGATGAG ATCCAGCAAG AATTAGCACA GAAGGCTAAG GTATTACCTT GGCAGTCATG GTTAGAAGAG CAGTTGAGTG ACTGA
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Protein sequence | MTIQILSPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIEIDKGG SKLIKIQDNG SGIPKSELNL ALSRHATSKL STLDDLDAIL SFGFRGEALA SISSVSRLTL TSRTAEQTEA WQAYAEGSDM AVKVIPAAHP VGTTIEAVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL VKPEIHFTLK HNGKQVRNYR PANNQDQYLM RLAQICGKNF AEQAIEIDCQ HEGLTLSGYI QSPFFTSPAS DTQFFYVNGR LIRDRLVNHA VRQAFSEHGT GELASYVLML EIAPHQVDVN VHPAKHEVRF HQSRYVHDYI LQALQSALMQ VARASISLPE EKLVEFVEDD WHSKPLSTGR VSEADPSNYA TQSKFDEKPR ESGSQGQSSS ISAPSSYSRG GEYSARSQPE LPSASEIASY TQLLKTPQTA QASKLVNSDL KTPMPPVLAG QYWVYAGDEL SLLPIDIVAK WLVKRDILAK IDNGLVSQPL LMPVSIKVDE DWLNTIDERE QLLRQLGIEI TIRLGQLIIK KVPPYLRQSQ LVTVIPELLQ WVRFEEPTHE ALALWLAKQD DGKFESAVAT WSAFSQLDDE IQQELAQKAK VLPWQSWLEE QLSD
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