Gene Swoo_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4172 
SymbolmutL 
ID6118523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5073614 
End bp5075458 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content44% 
IMG OID641635734 
ProductDNA mismatch repair protein 
Protein accessionYP_001762523 
Protein GI170728497 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATAC AGATACTGTC ACCACAATTG GCAAACCAGA TCGCTGCTGG GGAGGTTGTC 
GAGCGACCCG CTTCGGTGAT TAAAGAGTTG GTTGAAAATA GCCTAGACGC TGGGGCTACC
CGTGTCGATA TTGAGATCGA TAAGGGTGGC AGTAAGCTAA TAAAAATCCA AGACAATGGC
TCTGGGATCC CTAAGTCAGA ACTGAATTTA GCGCTATCAA GGCATGCAAC TTCAAAGTTG
AGTACTTTAG ATGACTTAGA TGCAATTTTA AGTTTTGGTT TTCGTGGCGA GGCATTAGCG
AGTATCAGTT CGGTTTCTCG TTTGACTTTG ACCTCTCGAA CAGCAGAGCA AACTGAAGCT
TGGCAAGCTT ATGCCGAAGG TTCAGATATG GCTGTGAAAG TGATCCCTGC CGCTCATCCT
GTCGGAACGA CGATAGAAGC GGTTGATCTA TTTTTTAATA CTCCAGCCAG AAGGCGATTT
CTCAAAAGTG ATAAAACAGA GTTTACCCAT ATTGATGAAT GGCTTAAACG TATTGCTTTA
GTTAAACCTG AGATCCATTT CACCTTAAAA CACAATGGTA AGCAGGTTCG TAACTATCGT
CCTGCAAATA ATCAAGATCA ATACTTGATG CGTTTAGCAC AGATCTGCGG CAAAAACTTT
GCTGAGCAAG CCATTGAGAT AGATTGTCAA CATGAAGGCT TAACGTTAAG TGGCTATATA
CAATCCCCAT TTTTTACCTC TCCAGCTAGC GACACACAAT TTTTCTACGT CAACGGTAGG
TTAATTCGTG ACAGATTAGT GAATCATGCG GTGAGACAGG CATTTTCGGA ACATGGAACA
GGGGAGTTAG CTAGCTATGT GCTGATGTTA GAGATTGCTC CTCATCAGGT TGATGTTAAT
GTTCACCCAG CAAAGCACGA GGTGAGGTTC CACCAAAGCC GTTATGTACA TGATTACATA
CTCCAGGCTT TACAGTCTGC ATTGATGCAG GTAGCTAGAG CCTCAATCTC TCTTCCAGAA
GAGAAGCTGG TCGAGTTTGT CGAAGATGAT TGGCATAGTA AGCCTTTATC AACTGGGCGT
GTTAGCGAAG CCGATCCATC AAACTACGCA ACACAGTCTA AGTTTGATGA AAAGCCAAGA
GAGAGTGGTT CACAGGGGCA ATCGAGTTCA ATTTCTGCTC CATCATCCTA CTCAAGGGGC
GGGGAGTATA GCGCCCGTTC TCAGCCTGAA CTGCCTTCGG CGAGTGAGAT AGCCTCTTAT
ACTCAACTAT TAAAAACACC TCAGACGGCA CAAGCATCTA AATTAGTTAA TAGTGACTTA
AAGACTCCTA TGCCGCCAGT GTTAGCAGGC CAATATTGGG TCTATGCTGG TGATGAGCTT
TCTTTGCTGC CGATTGATAT CGTCGCAAAG TGGCTCGTGA AGCGTGATAT TTTAGCAAAA
ATTGATAATG GTTTAGTCAG CCAGCCTCTC CTTATGCCTG TTTCAATAAA GGTTGATGAA
GATTGGCTCA ATACTATCGA TGAGAGGGAG CAACTGTTAA GGCAATTAGG GATTGAGATA
ACTATTCGTC TTGGGCAGTT GATTATAAAG AAAGTGCCCC CATATTTAAG ACAGAGCCAG
TTAGTTACTG TTATTCCTGA ATTGTTGCAA TGGGTAAGGT TTGAAGAGCC GACCCATGAA
GCGCTAGCGT TGTGGTTAGC AAAGCAAGAT GATGGAAAGT TTGAATCTGC AGTAGCAACT
TGGTCAGCAT TTAGTCAGTT GGATGATGAG ATCCAGCAAG AATTAGCACA GAAGGCTAAG
GTATTACCTT GGCAGTCATG GTTAGAAGAG CAGTTGAGTG ACTGA
 
Protein sequence
MTIQILSPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIEIDKGG SKLIKIQDNG 
SGIPKSELNL ALSRHATSKL STLDDLDAIL SFGFRGEALA SISSVSRLTL TSRTAEQTEA
WQAYAEGSDM AVKVIPAAHP VGTTIEAVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
VKPEIHFTLK HNGKQVRNYR PANNQDQYLM RLAQICGKNF AEQAIEIDCQ HEGLTLSGYI
QSPFFTSPAS DTQFFYVNGR LIRDRLVNHA VRQAFSEHGT GELASYVLML EIAPHQVDVN
VHPAKHEVRF HQSRYVHDYI LQALQSALMQ VARASISLPE EKLVEFVEDD WHSKPLSTGR
VSEADPSNYA TQSKFDEKPR ESGSQGQSSS ISAPSSYSRG GEYSARSQPE LPSASEIASY
TQLLKTPQTA QASKLVNSDL KTPMPPVLAG QYWVYAGDEL SLLPIDIVAK WLVKRDILAK
IDNGLVSQPL LMPVSIKVDE DWLNTIDERE QLLRQLGIEI TIRLGQLIIK KVPPYLRQSQ
LVTVIPELLQ WVRFEEPTHE ALALWLAKQD DGKFESAVAT WSAFSQLDDE IQQELAQKAK
VLPWQSWLEE QLSD