| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4164 |
|---|
| Symbol | |
|---|
| ID | 6118515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5066100 |
|---|
| End bp | 5066801 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641635726 |
|---|
| Product | cytochrome c1 |
|---|
| Protein accession | YP_001762515 |
|---|
| Protein GI | 170728489 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2857] Cytochrome c1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0116839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAATTATTGC ATTAGTTACC TTAATTCCGT CTCTAGCATT TGCTGCTGGT
GGATCACATG TACCTTTAGA GAGTGCAAAT ATTGATCTCC ATGATAAAGA GTCACTACAA
CGTGGTTTAG ATAGTTTTCA GCACTACTGT GCTGGCTGTC ATAGTACTCA ATATCAGCGT
TATGGCCGTG TTGCCGATGA CTTAGGCATC TCTGTTGATG ATATGCGTGC TAAGTATATA
TTTGACGATA GCATTAAGAT CGGTAGCTTG ATGGAAAACT CCATTCCATC TAAAGATGCT
GCTAAGTGGT TTGGTGCTAC TCCACCAGAT CTGACCTTAG TTGCACGAGT ACGTGGTGAA
GATTGGATCT ACTCTTATCT GAAAGGTTTC TACCATGATG AGAGCCGTCC ATTCGGTGTG
AATAATACTG TATTCCCATC TGTAGGTATG CCTCATGTAA TGCAGGAGCT ACAAGGCCTT
CCAGTTAAGC AAGAGGATGG CACAATAGTT TCTACTGGTG GCAAGCTAAA TGCTGAAGAG
TATGATCAAG TGGTTCGTGA TATCACCGGA TTCCTCGTTT ACTCGGGTGA TCCTGTTAAA
CTTGAGCGTG AAAGCTTAGG TTGGTGGGTA ATGGGCTTCC TGTTTATCTT CTTCATCATT
GCTTACTTCC TGAAGAAAGA GTACTGGAAA GATGTACACT AA
|
|---|
| Protein sequence | MKKLIIALVT LIPSLAFAAG GSHVPLESAN IDLHDKESLQ RGLDSFQHYC AGCHSTQYQR
YGRVADDLGI SVDDMRAKYI FDDSIKIGSL MENSIPSKDA AKWFGATPPD LTLVARVRGE
DWIYSYLKGF YHDESRPFGV NNTVFPSVGM PHVMQELQGL PVKQEDGTIV STGGKLNAEE
YDQVVRDITG FLVYSGDPVK LERESLGWWV MGFLFIFFII AYFLKKEYWK DVH
|
|---|
| |