Gene Swoo_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4162 
Symbol 
ID6118513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5064897 
End bp5065361 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID641635724 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001762513 
Protein GI170728487 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0156887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA TGACCCCGAA TCGTCCATAT TTATTACAGG CATATTATGA CTGGTTAATG 
GATAATGAGT TGACCCCACA TGTCGTTGTT GACGCCTTTG TTCCGGGTAC TCAAGTTCCA
CAGCAATATG TTAAAGATGG TCAGATTGTA CTTAATATCA CCTCTTCAGC TGTAGGTAAT
CTACAGATTG GTCATGAGTA TATTGAGTTC AATGCACGTT TTGGTGGTGT ACCTCAGCAG
GTTGTTCTTC CTATGGCATC AATTGTTGCT ATCTACGCCA GAGAAAATGG TGCAGGTACT
GTTTTTGATG TAGAGGAAGC CTATCAACTT GAAGATGATG AGTTTGAGTC TGGTTTATCT
GTAGTTGAAG AAGCAGAAGA TGAAGACGTT GTCATTGAGG CTGTGGATGA AACTCCTAAA
ACATCAGAGC CAAAGCGACG AGGTCACCTG ACGCTGGTTA AGTAA
 
Protein sequence
MKPMTPNRPY LLQAYYDWLM DNELTPHVVV DAFVPGTQVP QQYVKDGQIV LNITSSAVGN 
LQIGHEYIEF NARFGGVPQQ VVLPMASIVA IYARENGAGT VFDVEEAYQL EDDEFESGLS
VVEEAEDEDV VIEAVDETPK TSEPKRRGHL TLVK