Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4162 |
Symbol | |
ID | 6118513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5064897 |
End bp | 5065361 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635724 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | YP_001762513 |
Protein GI | 170728487 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0156887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTA TGACCCCGAA TCGTCCATAT TTATTACAGG CATATTATGA CTGGTTAATG GATAATGAGT TGACCCCACA TGTCGTTGTT GACGCCTTTG TTCCGGGTAC TCAAGTTCCA CAGCAATATG TTAAAGATGG TCAGATTGTA CTTAATATCA CCTCTTCAGC TGTAGGTAAT CTACAGATTG GTCATGAGTA TATTGAGTTC AATGCACGTT TTGGTGGTGT ACCTCAGCAG GTTGTTCTTC CTATGGCATC AATTGTTGCT ATCTACGCCA GAGAAAATGG TGCAGGTACT GTTTTTGATG TAGAGGAAGC CTATCAACTT GAAGATGATG AGTTTGAGTC TGGTTTATCT GTAGTTGAAG AAGCAGAAGA TGAAGACGTT GTCATTGAGG CTGTGGATGA AACTCCTAAA ACATCAGAGC CAAAGCGACG AGGTCACCTG ACGCTGGTTA AGTAA
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Protein sequence | MKPMTPNRPY LLQAYYDWLM DNELTPHVVV DAFVPGTQVP QQYVKDGQIV LNITSSAVGN LQIGHEYIEF NARFGGVPQQ VVLPMASIVA IYARENGAGT VFDVEEAYQL EDDEFESGLS VVEEAEDEDV VIEAVDETPK TSEPKRRGHL TLVK
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