Gene Swoo_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4157 
Symbol 
ID6118508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5057806 
End bp5058129 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content44% 
IMG OID641635719 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001762508 
Protein GI170728482 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.496256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATG AGTTTCTACT GGTCATGACC AGCTGCCCAA CCTCTGAACT GGCGACCAAA 
ATTGCTCAGG TGTTAGTGGG GAGTAAGCTG GCTGCTTGTA TACAGGTATC AGCTCCTGTT
ACCTCAATAT ATGAGTGGCA AGGAGAGATA TGTGAAGAGA CAGAATTCAA CCTGCAGATA
AAATGTTTAG CGCTGAACTA TTCAGAGATA GAGACTCAAA TAAAACAGCT GCATCCCTAC
GAGGTACCAG AAATCATCGC TGTCCCTATC AGTCATGGTT TACCTGACTA CCTTAAGTGG
ATACATGATG TGAGTAAGAG ATAA
 
Protein sequence
MQDEFLLVMT SCPTSELATK IAQVLVGSKL AACIQVSAPV TSIYEWQGEI CEETEFNLQI 
KCLALNYSEI ETQIKQLHPY EVPEIIAVPI SHGLPDYLKW IHDVSKR