Gene Swoo_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4149 
Symbol 
ID6118500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5048044 
End bp5049276 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content45% 
IMG OID641635711 
Productpeptidase T 
Protein accessionYP_001762500 
Protein GI170728474 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2195] Di- and tripeptidases 
TIGRFAM ID[TIGR01882] peptidase T 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.652019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.399065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAG CATTATTAAC GCGTTTTCTA CGTTATATAA AGATTGATAC TCAGTCTAAG 
GCTAGTAATA CTCGCTCTCC GAGCAGTGAC TCGCAGCTTG AATTTGCTGT TATTTTAAAG
CAGGAACTTG AACAGCTTGG GTTTGAGCGC GTTGAGTTAA GCCATTTAGG TTATTTGACT
GCGAGTGTTC CAAAAACAGT TGATGGCGTG CCCTGTATTG GCTTTATCGC TCACCTTGAT
ACAGCTCCTG ACTTCTGCGG CGCTAATATA ACTCCGCAAA TTATTGAAAA CTACGACGGG
GAAGATATTC TGCTGGGTGA CAGTGATCTA CTGAGTACTG AGCAGTTTCC AAGTCTGCTT
AATTATGTTG GCCAAACCCT TATCACTACA GATGGAACCA CTCTGTTAGG TGGCGATGAT
AAGGCTGGAA TAGCCGAAAT TATTACAGCC CTAGCTCATC TTATTGAGCA TCCTGAGATC
CCTCACGGAG AGATTCGACT CTGTTTTACA CCGGATGAAG AGATAGGTCG AGGAGCCGGT
CACTTTGATG TTCCGGGCTT TGGTGCACAG TGGGCATATA CCATAGATGG TGGGGAGTTA
GGGGAGCTTG AGTACGAGAA TTTTAATGCT GCAACGGCAG TGATCCGGGC TAAAGGTAAT
AACTGTCACC CAGGGACAGC CTACGGTGTG ATGGTGAATG CGCAGACCAT GGCGGCGCGT
TTTCACGCTA AAATGCCTCT GCAAGATACA CCAGAAGGCA GTAAGGACTA TGATGGTTTC
TTCCATCTTG TGAATATGCA AGGACAAACA GAGGAAGCTG AATTAACTTA CCTTATTCGG
GATTTCGATA TCGATATTTT CGAACAAAGA AAGCGCTGGC TAACAGAGCG GGTAAACAGT
TATAACGCTG ATCTGGTGGT GGGCAGCTTA GAGATTGAGA TAACAGACAG TTATTTTAAT
ATGAAGGAGC AGATTATCCC TCACCCGCAT GTTGTCGATA TTGCTAAAGA GGCGATAACC
TCACAAGGTA TCACGCCGTT AGTTAAGCCT ATCAGAGGCG GTACCGATGG AGCTAGGCTT
TCCTATATGG CGCTACCTTG TCCGAACATC TTTACCGGTG GGCATAACTT TCATGGGAAA
CATGAATATA TTTGTGTTGA ATCTATGGAG AAGGCGGCTG GGGTTATCTT AGCTATCTGC
TCATTAACTT GTGAAAAGTA TTTGAATCGT TAG
 
Protein sequence
MRQALLTRFL RYIKIDTQSK ASNTRSPSSD SQLEFAVILK QELEQLGFER VELSHLGYLT 
ASVPKTVDGV PCIGFIAHLD TAPDFCGANI TPQIIENYDG EDILLGDSDL LSTEQFPSLL
NYVGQTLITT DGTTLLGGDD KAGIAEIITA LAHLIEHPEI PHGEIRLCFT PDEEIGRGAG
HFDVPGFGAQ WAYTIDGGEL GELEYENFNA ATAVIRAKGN NCHPGTAYGV MVNAQTMAAR
FHAKMPLQDT PEGSKDYDGF FHLVNMQGQT EEAELTYLIR DFDIDIFEQR KRWLTERVNS
YNADLVVGSL EIEITDSYFN MKEQIIPHPH VVDIAKEAIT SQGITPLVKP IRGGTDGARL
SYMALPCPNI FTGGHNFHGK HEYICVESME KAAGVILAIC SLTCEKYLNR