Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4149 |
Symbol | |
ID | 6118500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5048044 |
End bp | 5049276 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635711 |
Product | peptidase T |
Protein accession | YP_001762500 |
Protein GI | 170728474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.652019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.399065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAAG CATTATTAAC GCGTTTTCTA CGTTATATAA AGATTGATAC TCAGTCTAAG GCTAGTAATA CTCGCTCTCC GAGCAGTGAC TCGCAGCTTG AATTTGCTGT TATTTTAAAG CAGGAACTTG AACAGCTTGG GTTTGAGCGC GTTGAGTTAA GCCATTTAGG TTATTTGACT GCGAGTGTTC CAAAAACAGT TGATGGCGTG CCCTGTATTG GCTTTATCGC TCACCTTGAT ACAGCTCCTG ACTTCTGCGG CGCTAATATA ACTCCGCAAA TTATTGAAAA CTACGACGGG GAAGATATTC TGCTGGGTGA CAGTGATCTA CTGAGTACTG AGCAGTTTCC AAGTCTGCTT AATTATGTTG GCCAAACCCT TATCACTACA GATGGAACCA CTCTGTTAGG TGGCGATGAT AAGGCTGGAA TAGCCGAAAT TATTACAGCC CTAGCTCATC TTATTGAGCA TCCTGAGATC CCTCACGGAG AGATTCGACT CTGTTTTACA CCGGATGAAG AGATAGGTCG AGGAGCCGGT CACTTTGATG TTCCGGGCTT TGGTGCACAG TGGGCATATA CCATAGATGG TGGGGAGTTA GGGGAGCTTG AGTACGAGAA TTTTAATGCT GCAACGGCAG TGATCCGGGC TAAAGGTAAT AACTGTCACC CAGGGACAGC CTACGGTGTG ATGGTGAATG CGCAGACCAT GGCGGCGCGT TTTCACGCTA AAATGCCTCT GCAAGATACA CCAGAAGGCA GTAAGGACTA TGATGGTTTC TTCCATCTTG TGAATATGCA AGGACAAACA GAGGAAGCTG AATTAACTTA CCTTATTCGG GATTTCGATA TCGATATTTT CGAACAAAGA AAGCGCTGGC TAACAGAGCG GGTAAACAGT TATAACGCTG ATCTGGTGGT GGGCAGCTTA GAGATTGAGA TAACAGACAG TTATTTTAAT ATGAAGGAGC AGATTATCCC TCACCCGCAT GTTGTCGATA TTGCTAAAGA GGCGATAACC TCACAAGGTA TCACGCCGTT AGTTAAGCCT ATCAGAGGCG GTACCGATGG AGCTAGGCTT TCCTATATGG CGCTACCTTG TCCGAACATC TTTACCGGTG GGCATAACTT TCATGGGAAA CATGAATATA TTTGTGTTGA ATCTATGGAG AAGGCGGCTG GGGTTATCTT AGCTATCTGC TCATTAACTT GTGAAAAGTA TTTGAATCGT TAG
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Protein sequence | MRQALLTRFL RYIKIDTQSK ASNTRSPSSD SQLEFAVILK QELEQLGFER VELSHLGYLT ASVPKTVDGV PCIGFIAHLD TAPDFCGANI TPQIIENYDG EDILLGDSDL LSTEQFPSLL NYVGQTLITT DGTTLLGGDD KAGIAEIITA LAHLIEHPEI PHGEIRLCFT PDEEIGRGAG HFDVPGFGAQ WAYTIDGGEL GELEYENFNA ATAVIRAKGN NCHPGTAYGV MVNAQTMAAR FHAKMPLQDT PEGSKDYDGF FHLVNMQGQT EEAELTYLIR DFDIDIFEQR KRWLTERVNS YNADLVVGSL EIEITDSYFN MKEQIIPHPH VVDIAKEAIT SQGITPLVKP IRGGTDGARL SYMALPCPNI FTGGHNFHGK HEYICVESME KAAGVILAIC SLTCEKYLNR
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