Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4134 |
Symbol | |
ID | 6118484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5027080 |
End bp | 5027811 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635695 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001762485 |
Protein GI | 170728459 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0859841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCC CAAGAATATA TCAGGCATCG CCATTACAAA TAGGCAATCA AGTCGAGCTT GATGATGAGC CAGCCTCTCA TATCGGCCGA GTACTACGTA TGAATGCGGG CGAGCAGATC AGCTTGTTTA ATGGTGATGG CCATGAATAC CTGTCAGAGA TCATCTCTGC CAGTAAGAAA AATGTCTCTG TTAAGGTCCT ATCTTCAACG CTTAATGAAA GCGAGTCACC ACTCCACCTT CACTTAGGAC AGGTGATCTC TCGCGGAGAT CGCATGGATT TCACCATACA GAAATCTGTT GAACTTGGTG TAAATACTAT TACGCCACTG TTTTCTGAAC GCTGTGGCGT GAAGCTCTCA GGCGAACGTT TAGAGAAAAA AATACAGCAG TGGCAGAAAA TAGTAATAGG GGCTTGTGAG CAGTCTGGTC GTAGTCAGGT ACCGGAAATA AGGCCGGCAA TGACAATTGA AGCCTGGAGC GCCGAGCAAA CTGATGCAAC AAAATTGAAT CTACACCCAA GAGCCGCCCA CGGCATCGGT GGTTTATCGC TAACATCGCC TAAAGTAAGG CTACTTATTG GTCCTGAAGG CGGACTATCT GAAGCTGAGA TTATGATGAC AGAGCAGTAT CAGTTTACAG ATGTTCTGCT TGGCCCAAGA GTATTAAGAA CAGAAACTGC AGCACTCACA GCCATTAGCG CCCTGCAATT AAGATTTGGA GATTTGGGTT AA
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Protein sequence | MRIPRIYQAS PLQIGNQVEL DDEPASHIGR VLRMNAGEQI SLFNGDGHEY LSEIISASKK NVSVKVLSST LNESESPLHL HLGQVISRGD RMDFTIQKSV ELGVNTITPL FSERCGVKLS GERLEKKIQQ WQKIVIGACE QSGRSQVPEI RPAMTIEAWS AEQTDATKLN LHPRAAHGIG GLSLTSPKVR LLIGPEGGLS EAEIMMTEQY QFTDVLLGPR VLRTETAALT AISALQLRFG DLG
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