Gene Swoo_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4133 
Symbol 
ID6118483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5026316 
End bp5027071 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content44% 
IMG OID641635694 
Productdeoxyribonuclease I 
Protein accessionYP_001762484 
Protein GI170728458 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0867821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCGT TAACTAAAAT CGGCCCAGCC TTCTTAATAG GTTTAGGGCT ATCTTTGCTA 
TTTTCTGCGC CAACTTTTGC CTCAGGCTCT CACCCAAGCA GCTTTTACCA AGCGAAGAAA
CGTGCAAAAG AGATCTATGC TCGCTCGCTT CCGGCAACCA GCTTTTACTG TGGCTGTGAT
ATCAAAATCA ATGGAAAGAA ATGGCAAACA GATTTTGAAA CTTGTGGCTA TCAAGTCAGA
AAGCAGGAAA AACGTGCAGC CAGAATCGAA TGGGAACATA TCGTACCCGC GTGGGAGTTC
GGCCACCAGC GTCAATGTTG GCAGGAGGGA GGACGTAAAA ACTGCGGTAA AAAAGATCAA
CAGTTCAAAA AGATGGAGTC AGATCTTCAT AACTTAGTTC CAGCTATCGG TGAGGTCAAC
GGCGACAGAA GTAATTATCG ATTCAGCCAA TGGAACGCCT CACCTGAGCA GTATGGTCAA
TGTGCTATGG TGGTTGATTT TAAATCGAGA AAAGCTGAGC CCCCCAGCTA TACACGAGGC
CAAATAGCGA GAACCTATCT TTATATGCAA CAAGCATATG GTTTAAAAAT TGCGAAAAGC
CAATTAAAGC TATTTAAGGC ATGGGATAAA ACCTATCCAG TTGATACTAT TGAGTGCAAA
AGAGACAGAG AGATAGCTCG CACTCAGGGG AATCATAACC CCTTTGTAAA AAACCTTTGT
GACGCACAAG CAAGAACTCA ATCTCTTGCG GAGTAG
 
Protein sequence
MKSLTKIGPA FLIGLGLSLL FSAPTFASGS HPSSFYQAKK RAKEIYARSL PATSFYCGCD 
IKINGKKWQT DFETCGYQVR KQEKRAARIE WEHIVPAWEF GHQRQCWQEG GRKNCGKKDQ
QFKKMESDLH NLVPAIGEVN GDRSNYRFSQ WNASPEQYGQ CAMVVDFKSR KAEPPSYTRG
QIARTYLYMQ QAYGLKIAKS QLKLFKAWDK TYPVDTIECK RDREIARTQG NHNPFVKNLC
DAQARTQSLA E