Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4133 |
Symbol | |
ID | 6118483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5026316 |
End bp | 5027071 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635694 |
Product | deoxyribonuclease I |
Protein accession | YP_001762484 |
Protein GI | 170728458 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0867821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATCGT TAACTAAAAT CGGCCCAGCC TTCTTAATAG GTTTAGGGCT ATCTTTGCTA TTTTCTGCGC CAACTTTTGC CTCAGGCTCT CACCCAAGCA GCTTTTACCA AGCGAAGAAA CGTGCAAAAG AGATCTATGC TCGCTCGCTT CCGGCAACCA GCTTTTACTG TGGCTGTGAT ATCAAAATCA ATGGAAAGAA ATGGCAAACA GATTTTGAAA CTTGTGGCTA TCAAGTCAGA AAGCAGGAAA AACGTGCAGC CAGAATCGAA TGGGAACATA TCGTACCCGC GTGGGAGTTC GGCCACCAGC GTCAATGTTG GCAGGAGGGA GGACGTAAAA ACTGCGGTAA AAAAGATCAA CAGTTCAAAA AGATGGAGTC AGATCTTCAT AACTTAGTTC CAGCTATCGG TGAGGTCAAC GGCGACAGAA GTAATTATCG ATTCAGCCAA TGGAACGCCT CACCTGAGCA GTATGGTCAA TGTGCTATGG TGGTTGATTT TAAATCGAGA AAAGCTGAGC CCCCCAGCTA TACACGAGGC CAAATAGCGA GAACCTATCT TTATATGCAA CAAGCATATG GTTTAAAAAT TGCGAAAAGC CAATTAAAGC TATTTAAGGC ATGGGATAAA ACCTATCCAG TTGATACTAT TGAGTGCAAA AGAGACAGAG AGATAGCTCG CACTCAGGGG AATCATAACC CCTTTGTAAA AAACCTTTGT GACGCACAAG CAAGAACTCA ATCTCTTGCG GAGTAG
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Protein sequence | MKSLTKIGPA FLIGLGLSLL FSAPTFASGS HPSSFYQAKK RAKEIYARSL PATSFYCGCD IKINGKKWQT DFETCGYQVR KQEKRAARIE WEHIVPAWEF GHQRQCWQEG GRKNCGKKDQ QFKKMESDLH NLVPAIGEVN GDRSNYRFSQ WNASPEQYGQ CAMVVDFKSR KAEPPSYTRG QIARTYLYMQ QAYGLKIAKS QLKLFKAWDK TYPVDTIECK RDREIARTQG NHNPFVKNLC DAQARTQSLA E
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