Gene Swoo_4132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4132 
Symbol 
ID6118482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5025549 
End bp5026187 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID641635693 
Productprotein of unknown function DUF335 SprT 
Protein accessionYP_001762483 
Protein GI170728457 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.047618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGTT TTTCCGAGCA TCGATTAATA GATGAGCCAG TGGTATTGAT GTTTAACTTA 
TTCCGCCCCT CTAATACTAA AACATTAAGT AAAAAAAACT TAAGAGCGAA ATCTAGCACC
AATCAAGCTG AGTATTTCAA CCTAACACAC ACATTTTCCT CTGCACTTCA TAACCAAGTG
GCTCTAAGGG TTCTTGAGTG CTATGACATA GCAGAAAAAC AGCTAAAACA GGTTTTTCCG
AGACCCGAGA TCAACTTTAA ACTCAGAGGA AAAAGTGCGG GTACCGCACA CCTACAACAA
AACCAACTCA GGTTTAACTC CACCTTGCTG ACTGAAAACC AAGATGCCTT CTTTGAGCAA
GTGATCCCCC ATGAAATTTG CCACTTACTT GCTCATCAAC TCTACGGTAG AGTTAAGCCC
CACGGTCGGG AGTGGCAAGC ACTAATGGTC ACCTTATTTA AATTACATCC CAGCACAACC
CACAGTATGA ATACCCAATC GGTGGAGGGT AAACAGTTCT CTTATCGGTG CGACTGTGGA
CCCGTTAACC TCAGTGTCAG ACGCCACAAC AAGGTTGTCA GAGGCGAAAC CCAATACCGA
TGCAGACGCT GTAAGAGAGA GTTAGTGGCT GACTTATAA
 
Protein sequence
MLGFSEHRLI DEPVVLMFNL FRPSNTKTLS KKNLRAKSST NQAEYFNLTH TFSSALHNQV 
ALRVLECYDI AEKQLKQVFP RPEINFKLRG KSAGTAHLQQ NQLRFNSTLL TENQDAFFEQ
VIPHEICHLL AHQLYGRVKP HGREWQALMV TLFKLHPSTT HSMNTQSVEG KQFSYRCDCG
PVNLSVRRHN KVVRGETQYR CRRCKRELVA DL