| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4127 |
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| Symbol | |
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| ID | 6118477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5019970 |
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| End bp | 5020677 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635688 |
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| Product | peptidase C39 bacteriocin processing |
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| Protein accession | YP_001762478 |
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| Protein GI | 170728452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3271] Predicted double-glycine peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000936066 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCT TTTTGCAATA CACATTAATT GTCGTACTTG TGTCTCTGTT ATCTATTCCC
ATTTTTTCTT TGGTTGCCGC TGAGATGGTA CTTGACGGTT TAGTCAAAGG CATGGGGAGT
TATAGCAAAG AGATACAGAG TATACGTGAG CGTCGTTTTG AGTATGTGAT AGAGCAGAAA
ACAGACTTTT CATGTGGGGC CGCGAGCCTT GCGAGCATAC TTAAGTACGC TTATGGCAAT
GATGAGATAA CTGAGCAGAG TGTATTGCTT GGCATGTTGG AATCAGCCGA TATTGATGTG
GTTAAACAGC AGGGGTTTTC TCTGCTGGAT ATGAAGCGAT ACCTTACTGC CCGTGAATTC
AGAGGGCGAG GCTACAACAT AAGTGATGAG GAGCTACTGC TACTGAAGAT CCCTGCGATT
GTACTGTTAA ACGACTCTGG TTATCACCAT TTTGTGGTGT TAAGGCGTGT AGAGGATGGA
CTGGTCTATC TGGGAGATCC TGCGTTAGGA AATAGGATAA TGGCACTGGA TGAGTTTGTT
CAGAAGTGGA ATCGGGTTGT ATTTGTGGTC ATTGGTAAAG AGTACGACAA GCAGAACAAG
CTGCTGCAAC CTCGGGCCAG ACTCACTTAT CGGGCTTTAT CTACCCATAA GCCATTAACC
GATGCGGAGC TAATGGAGTT TGGGTTCGCG TATTCAGACA TGCTTTAG
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| Protein sequence | MNIFLQYTLI VVLVSLLSIP IFSLVAAEMV LDGLVKGMGS YSKEIQSIRE RRFEYVIEQK
TDFSCGAASL ASILKYAYGN DEITEQSVLL GMLESADIDV VKQQGFSLLD MKRYLTAREF
RGRGYNISDE ELLLLKIPAI VLLNDSGYHH FVVLRRVEDG LVYLGDPALG NRIMALDEFV
QKWNRVVFVV IGKEYDKQNK LLQPRARLTY RALSTHKPLT DAELMEFGFA YSDML
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