| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4124 |
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| Symbol | |
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| ID | 6118474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5016723 |
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| End bp | 5017634 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635685 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762475 |
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| Protein GI | 170728449 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.774115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000191033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAGATC TTAACGGTAT GATGCTGTTT GCAGCGGTTG TTAGAGCCAA AGGCTTCTCT
CAAGCCGCCC GTGAAATTGG CATGCCAAAA TCAACCATAA GTCGTAAGGT TGCTCAATTA
GAGGAGCAAC TTGGAGTCAG ATTACTGCAG CGAGACACTC GAAATTTGAG TCTCACTCAG
GTGGGTGCAC TCTTTTTTCA GCACTGTACT AGCATCAGTG ATGAGATTGA AGCAGCTAAG
GCCACCATTG AAAATACCCA TAATGATGTA TCTGGGTCAT TAAGAGTCGC GATCCCTGTC
TCATTCAGTC AGGAGCTGAT TGCCAACTTG TGCAGTAGTT TTATGCGTCT TTACCCAAAT
ATCGAATTAG ATGTGCAGTT TACTGACAGA GAGGTGGGGC TGGTAGGTGA AGGTTACGAC
ATTGCGATTA AGTATGGGCC GCTGCAATCA TCCGATCTGG TGGCGCGCTT ACTTCTGGAG
CGACAGCCTA TTTTGGTCGC CAGTCCAGGT TACCTTAAAG CCAACGGCAC ACCTGCAACA
CCACAGGAGT TGATGGAGCA TAGCGGGATC TTATTGGGTA CTTCTCGCTC GGCACCTATC
TGGCCTCTAG GTAAAGGCGC TAGAAAAACC ATGGTCAGCT TTAAGCGTAA AGTCAGGGTC
AATAGTGCAG TCATGGTCAA GCAGTTAGTT CTGGATGATT TTGGCATCGC CATGCTATCT
AATTCTGTGT GTAAAAATGA GCTAGCCAGT GGCTCACTGG TTCCCCTATT GCAAGAGTGG
CCAATTGAGC CAATTAAGGT CTATGGAGTC TATTCCAGCA GGCGACAGCT GGCTGCTAAT
ATCAGTGTTT TTCTCGACTT TTTTACCAAA CGTTTCAATA GCCATGAGTC ACTGCAGTCG
TTAATGATGT AA
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAAREIGMPK STISRKVAQL EEQLGVRLLQ RDTRNLSLTQ
VGALFFQHCT SISDEIEAAK ATIENTHNDV SGSLRVAIPV SFSQELIANL CSSFMRLYPN
IELDVQFTDR EVGLVGEGYD IAIKYGPLQS SDLVARLLLE RQPILVASPG YLKANGTPAT
PQELMEHSGI LLGTSRSAPI WPLGKGARKT MVSFKRKVRV NSAVMVKQLV LDDFGIAMLS
NSVCKNELAS GSLVPLLQEW PIEPIKVYGV YSSRRQLAAN ISVFLDFFTK RFNSHESLQS
LMM
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