| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4117 |
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| Symbol | |
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| ID | 6118467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5005264 |
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| End bp | 5006289 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635678 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001762468 |
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| Protein GI | 170728442 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.344929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAG AAGACAAGTT AACAGTACCG ACTGAGGCAA CCACCCTATC TTCTTGGGCT
CTTGCCATCT GCCGAACCAT AGACAGTTAC GGCGTCGAAA GTGGCGAATT ACTGCAGCAA
GTTGGTATTA ACCCCACACT ACTTCAAGAC CCCAATGCTC GCATACCAAC AAAGCTCGTC
ACACAACTTT GGCAACTGGC AGTGGTGACG ACCGGAGATG AATCCATAGG ACTAAAGGTG
GCTAATTTTG TTCAGCCAAC CAGTTTTAAT GCTTTAAGCT TTTCGCTGCT AGTCAGTGAG
TCACTACTTG ATGCTTGGGA GCGGGTAAAA CGCTACTATG AGATCATCAG CAATGTGCTA
GAGATGAAAA TCGAGAGAGG CGAAAAAGAG TCCGCACTCT GCTTTATTCG TTTACCCGAA
AAACACTATG CCGATGAGGC GATAGATGCC TTTATGGCAA CAAACCTCTC TATATCGCGA
CAGATAAGTC ATGGGCAACT GCAACCAAGT AAGCTCGAAC TTGAGCGAGC CACTCCCATA
AACCTTAGCC CCTTTCACTC GCTGTTTCTC TGTCCAATCG AATTCAATTC TGATGGTAAT
CGTATCTACT TTACCAATGA AGCACTTAAC ATCCCATTTC CCTCAGCTAA TAGGGCGCTA
GCACTGAAAA ATGATCTTGC CGTTGAGGAG TACCTAGCTC AGCTCTCGGC TCAATCCTTC
AGCAGCAAGG TTGCTAAAGA GATAGTTATC GCCATGAGCC TAGGTAACCC AGAGCGAGAA
AGCATAGCTA AAACATTCCA TATGAGCAGT CGAAACCTCC AGAGAAAGCT AAAACATGAG
CAGACCAGCT TCAGTGAACT GTTAGATTCC ATCCGTAAGG ATCTTGCATT GAAATACATA
CTCAATTCTG AAGTTGCAAT TATTGAGATA TCTTTTCGAT TAGGCTTCAA AGACCCAAGT
AATTTTACCC GTGCATTTAA ACGCTGGTAC CAGAAATCTC CCCTCCAATA CCGTAAACAG
AAATAA
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| Protein sequence | MTLEDKLTVP TEATTLSSWA LAICRTIDSY GVESGELLQQ VGINPTLLQD PNARIPTKLV
TQLWQLAVVT TGDESIGLKV ANFVQPTSFN ALSFSLLVSE SLLDAWERVK RYYEIISNVL
EMKIERGEKE SALCFIRLPE KHYADEAIDA FMATNLSISR QISHGQLQPS KLELERATPI
NLSPFHSLFL CPIEFNSDGN RIYFTNEALN IPFPSANRAL ALKNDLAVEE YLAQLSAQSF
SSKVAKEIVI AMSLGNPERE SIAKTFHMSS RNLQRKLKHE QTSFSELLDS IRKDLALKYI
LNSEVAIIEI SFRLGFKDPS NFTRAFKRWY QKSPLQYRKQ K
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