Gene Swoo_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4113 
Symbol 
ID6118463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4997819 
End bp4998901 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content48% 
IMG OID641635674 
Producthypothetical protein 
Protein accessionYP_001762464 
Protein GI170728438 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAA CGCTCAATAA TTTGGAAGAT TATGCCCGTG GCGCTGCTTT ACTCGGTGCA 
GGTGGTGGTG GCGATCCCTA TATTGGCCGC TTACTTGCTG AAGAAGCAAT TAAAACCTAT
GGCGCACCGC GTATTATTTC AGCCCAAGAA CTCGATGATG ACGCCGTCAT TATCTCAGTA
GCAATGATTG GTGCACCGAC AGTTTTGATT GAAAAGGCCT GCTCTGGCGA TGATATCGAC
CTGCTGATTA AGGCGATGGA AAAACGTCTA GGTAAACCCA TAGATGCCTT AATGCCGATA
GAGATTGGTG GTGTTAACTC TTGTTTGCCT TTGGTTGCAG CAGCACGAAC TGGCCTCCCC
TTAGTGAACT GCGATGGCAT GGGCCGAGCC TTTCCAGGTT TAGAGATGGT GACGTTCAAT
GTATATGGCT GTGCAATTTC GCCTGTTGTC ATGACAGATG AACACAACAA TCAAGTTGTC
ATCGATACCA ACAGCGCCGC CAAAGCTGAA AAGTTTGCTC GTAGCGTTGT CGGTGAGATG
GGATTAAGCG CCATGCTCTC CTGTTATCCC CTTAACGGTA AGCAACTTAA AAAATGGGGA
GTGCACGGCA CCATGACCCT CGCTCTGGAG TTAGGTCAAG CCATACGTTT GGGTCGTCGC
GACGATAATG CTGTGCACTC TTTACTGTCA GCCCTTAATC AAACGAGTTA TTACGCCCCT
GCAAGAGCCC TACTCACGGG AAAAGTTATC GATATTGAAC GGGTCACAAG GGACGGATTC
TCTTTCGGCC ACTGTGTAGT GCAGTCGTTT GATGGAGAGC ATGAGATCAA TTTGAGCTTT
CAAAATGAAT TTCTAAGCGC TAAGAGCCAA GACAAGTTTC TCGCCACTGT ACCCGACATT
ATAGCAGTCG TTGATAGTGA AAATGCAGAA CCTATCACGG CTGAAACCAT CAGGTTTGGC
CAACGAGTTT GTGTTATCGC CACCAGTGTC CCTGAGCTAA TGCGTACACC GCAAGCTCTA
GCAGTTTTTG GCCCTCGCTG CTTTGGTTTA GACACTGACT ATTTGCCGGT ACCGACGAAA
TAA
 
Protein sequence
MNLTLNNLED YARGAALLGA GGGGDPYIGR LLAEEAIKTY GAPRIISAQE LDDDAVIISV 
AMIGAPTVLI EKACSGDDID LLIKAMEKRL GKPIDALMPI EIGGVNSCLP LVAAARTGLP
LVNCDGMGRA FPGLEMVTFN VYGCAISPVV MTDEHNNQVV IDTNSAAKAE KFARSVVGEM
GLSAMLSCYP LNGKQLKKWG VHGTMTLALE LGQAIRLGRR DDNAVHSLLS ALNQTSYYAP
ARALLTGKVI DIERVTRDGF SFGHCVVQSF DGEHEINLSF QNEFLSAKSQ DKFLATVPDI
IAVVDSENAE PITAETIRFG QRVCVIATSV PELMRTPQAL AVFGPRCFGL DTDYLPVPTK