| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4107 |
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| Symbol | |
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| ID | 6118457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4988653 |
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| End bp | 4991175 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635668 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762458 |
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| Protein GI | 170728432 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACT TCTGGCTGAG CCTCACTGTT TTTATCAGTC ACTACCGTCA AGCCCCACTC
CAAGCTGGCG CGATCACTAT CGGCATCATA TTGGCTGTAA TGCTACTCAC AGGTGTGCGG
GCCACCAATG AAAACGCAAT TAAAAGCTAT AGCTCTGTCA CAGAGCTATT AAGCCAACAA
GCTAAATGGA ACATCACCCC AAGCCTAGGT AAGAAACACT TAGATGAGTC ACTCTATTTC
GACATTCGCG CAGCTGGATT TAACCAGAGT CTGCCAGTCA TTGAAGGGGT TGCCACCAGT
ACAGATAACA GACGATGGCG AATACAGGGA AGTGATTTAA TCGCTGCATT AAGTTCAACC
TTGAGCAACA GTGATAACAG CAGCCAAACC AACTCAGAGA ACAGTCACAG CCAACCCGCT
CTTTTCTCCA CAGCTATCCC ACTTGGGAAA CTGCTATCGG GTACTCCTAT CGTTATCATG
AGCCAATCGA TGGCTAAACA GTTCGATAAA GAGCCTAAAT TCTCGCTCTC TGGCATAGAG
CTTGAGATAG TCGCTCTCGA TGATAGTAGT CAATTAGGTT CGAGTATCTT AATGGATATC
TCTTTAGCGC AGAAGATACT CAAGCAGACG GGGCAGCTAA GCTATATCGC GCTATTTAGT
GATGTCTCAA ACCAGAGAGT TCAGCTTGAA ACCCTGCTCG GCAAACGCGG CAACCTGATT
GAAAGTGATA ACGGTGATAG TCTCACCGCC CTAACTGAGA GTTTTCATTT GAACCTAACA
GCCATGAGTT TACTGGCTTT TGTTGTGGGA TTATTTATCG CTTATAACGG AGTTAGGTAC
AGCTTACTCA AGAGGCAACG ATTGCTCACT CAGCTGCAAC AGCTAGGGGT AAATAAAGCT
GCCTTGATGT CTGCATTGCT CACAGAACTG GCTATCTTAG TACTATTGGG GTCTATAGCA
GGCTTTATCT TAGGTCTTCA GCTAAGTCAC TGGTTACAAC CTATGGTTTC AGTCACCCTT
GAGCAGCTCT ATGGCGCTAA AATTCTACCT GGAAACTGGC AGTGGTCCTG GCTGTTTCAA
GCATTTGCTT TAACCCTTTT CGCTGCACTT GCAGCATGTA GCTCACTCCT ACTCCAATTA
ACCCGCCAAG CTTTATCGGG AAGCTCTAAC CATTTTACCC AGATAAGCAA TACGGCTAAG
GTACAAAAAT ATCAGCTATT CACGGCGCTT TTTCTAGGCA CAATCGCTTG TATACTCCTG
CCTTTAAGTC AAGATTATCG CTATACCATG GCGCTGCTCG GGCTCGTTAT CATCGCCATT
CCACTAGCAT TGCCTACCTC TTTAACCATC ATGGTTAACC TACTGCTTAC GTGTATCAAT
AAACTCCAGC AAAAGATTGG GTTTAAAGGG TTACTGCATT ATCAGATAGC GGAAACTAAA
GAGTTAATCG CGCCGCTCTC TCTGGCCATG ATGGCAATGC TGCTTGCACT CACCGCCAAT
ATTTCAATGA ATACCTTAGT AGGAAGTTTC GAAACGACCC TCAAGCAGTG GTTAGAATCA
CGTTTACATG CTGAACTCTA TATCAGACCC GCCGCCGATC AGATGCTAGA GGTGGAAAGC
TTCTTAGCTA AACAAGCTGG TGTCGATGCC GTTTATAAAC AGTGGTACCT AAGGAGCCAA
CATGAGAAGC TACCTATTAA CTTAGTCACC CGTGATGAAG TCTCTTTAAG GGAAACCACA
GTACTAAAAT CATCCCTCAA AAGTCTCTGG CCTGAACTGC AAAGAGGTAC ACAGGTGATG
ATAAGTGAGC CTCTGGCCAT CAAGCTCCAG ATTAACTTAG GTGACGAATT AACCTTAGCT
GCGATCCCAA GTAAGCGTTT TACTGTTGGC GGCATATTCT ATGACTATGG CAATCCTTAT
GGTGAGATTA TTACCTCACC TAAGGTATGG AAAGAGCAGG ATTTTCCAGC TACCCCCTTA
AGTTTGGCGG TGGGTTATCA AGGTAAAACA GATAGATTAA AACAGGCTTT ACAGGAACAG
TTTTCCATCC CTGATGCGAT GATCTACAGT CAAGAGAAGA TAAAGCAGCA AGCGATTATC
ATGTTTAAAA AAACCTTCTC TATTACTCAG GTACTCAATA CATTAACTCT TCTTGTCGCG
GCTATCGGTC TCTTTAGCGC CTGCTTTATG CTAACTCAAG CCAGAATGGC GCCTATGGCT
CGTCTATACA CATTGGGAGT TAGCAGGGTA CAACTCACCC AGATGGTGTT CATTCAGATG
GGGATCATTG TCTTGTTTAC CTGCTTTGTC GCACTGCCGA CCGGTGCGAT ATTAGGCTAT
CTGTTGATCT ATAAGGTCAC TTTGCAAGCA TTTGGTTGGA GCATCGCCAT GGAGTGGGAC
TGGTTAGCCT ACGGCAAAGT GGTAGCCCTT GCACTTGTCG CAAGCTTATT TGCTGTTGCG
CTGCCTCTGT ATCAGCAGAC TAAAAAGCCA CTTATCTCCA GCTTACAAAG TGAGGTTTTA
TAA
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| Protein sequence | MNNFWLSLTV FISHYRQAPL QAGAITIGII LAVMLLTGVR ATNENAIKSY SSVTELLSQQ
AKWNITPSLG KKHLDESLYF DIRAAGFNQS LPVIEGVATS TDNRRWRIQG SDLIAALSST
LSNSDNSSQT NSENSHSQPA LFSTAIPLGK LLSGTPIVIM SQSMAKQFDK EPKFSLSGIE
LEIVALDDSS QLGSSILMDI SLAQKILKQT GQLSYIALFS DVSNQRVQLE TLLGKRGNLI
ESDNGDSLTA LTESFHLNLT AMSLLAFVVG LFIAYNGVRY SLLKRQRLLT QLQQLGVNKA
ALMSALLTEL AILVLLGSIA GFILGLQLSH WLQPMVSVTL EQLYGAKILP GNWQWSWLFQ
AFALTLFAAL AACSSLLLQL TRQALSGSSN HFTQISNTAK VQKYQLFTAL FLGTIACILL
PLSQDYRYTM ALLGLVIIAI PLALPTSLTI MVNLLLTCIN KLQQKIGFKG LLHYQIAETK
ELIAPLSLAM MAMLLALTAN ISMNTLVGSF ETTLKQWLES RLHAELYIRP AADQMLEVES
FLAKQAGVDA VYKQWYLRSQ HEKLPINLVT RDEVSLRETT VLKSSLKSLW PELQRGTQVM
ISEPLAIKLQ INLGDELTLA AIPSKRFTVG GIFYDYGNPY GEIITSPKVW KEQDFPATPL
SLAVGYQGKT DRLKQALQEQ FSIPDAMIYS QEKIKQQAII MFKKTFSITQ VLNTLTLLVA
AIGLFSACFM LTQARMAPMA RLYTLGVSRV QLTQMVFIQM GIIVLFTCFV ALPTGAILGY
LLIYKVTLQA FGWSIAMEWD WLAYGKVVAL ALVASLFAVA LPLYQQTKKP LISSLQSEVL
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