Gene Swoo_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4105 
Symbol 
ID6118455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4987165 
End bp4987635 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content38% 
IMG OID641635666 
ProductBLUF domain-containing protein 
Protein accessionYP_001762456 
Protein GI170728430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAG GAAAACAATA TATGCCGATT GTCCAACTTA TTTATTCGAG TTCAGTAAGT 
GAAGGCTTGA GTGTGATGGA GATTAAGGCT CTGGTTGAAA AGGCACAAAT AAACAATAGA
GCGCTATCTG TCACTGGTTT TCTTTGCGCT AATTCCTACT ACTTTTTACA GTGTATTGAG
GGAGAGTCTG CTGTTATTGA TGCTCTTTTT CAAAAAATAT CTAAAGACTC AAGGCACCAC
TCAATAACGG TTATTAACAA GAGAGAAGTT GATAATCAGC AGTTTAGAGC TTGGAGTATG
GGAGCTGTGT TGGATATCGA TAGACATATG AATATTGTTG ATGGTTTTTT TCCTGATGGT
GTATTTAACC CTTCTCTACT GTCAGAGCAA ACTAGCTTGG AGTTTATCGA GCAATTTTCT
CAAATTCGAA TAAGGACACA GGAGCGCACA ATTGAGAGCT TGTCGAAGTA G
 
Protein sequence
MREGKQYMPI VQLIYSSSVS EGLSVMEIKA LVEKAQINNR ALSVTGFLCA NSYYFLQCIE 
GESAVIDALF QKISKDSRHH SITVINKREV DNQQFRAWSM GAVLDIDRHM NIVDGFFPDG
VFNPSLLSEQ TSLEFIEQFS QIRIRTQERT IESLSK