Gene Swoo_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4102 
Symbol 
ID6118452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4982441 
End bp4983349 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content45% 
IMG OID641635663 
Producthypothetical protein 
Protein accessionYP_001762453 
Protein GI170728427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.576037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTC CAACTCAGTT AAAGGTTATC TTGGCCACTA CCTTCGCGCT ACTGGCATTT 
GCTGGGAACT CTGTTTTATG TCGTTTAGCT TTAGGTGACG GAGCTATAGA TGCCGCGAGT
TTTACCATCA TTCGGTTTCT ATCTGGCAGT TTAGTATTGG TGTTTATTTT GTTGCTGACT
AGGCTCATAA AACAGCAATC ACCCTATAAA GAGCAAAAAA GGAGTACTGG TCGAGGCTCT
TGGCTAGCGG GTTTTATGTT GTTCCTCTAC GGCGTGACTT TTTCATATGC ATATATCTCC
CTAGATACCG GAATGGGCGC CTTGATCCTG TTTGGTGCGG TGCAGCTTAC CATGATCTTG
ATAAGCCTAC TCTCTGGTAA TCGCTTGCAC TATTTTGAAT GGACAGGAGT GGTTATCGCC
TTTAGTGGAT TTGTGTATCT CGTTCTGCCG ACTTTGAGTA CACCATCAAT GACAGGGTTT
ATTTTGATGA CACTCTCTGG CGTAGCTTGG GGTTTGTACA CGGTAAAGGG GAGAGGTTGT
AAAGACCCCA TCTTAGACAC CACCTATAAC TTCATTAGAA CCTTACCTTT TATTGCCATT
TTACTTCTAC TTACAATCCA ATCTGCCAGC TTGACTCAAG CTGGGATCAT CTTTGCTGTC
TTGTCCGGTG CCATCGCATC CGGTGTTGGC TATGCATTAT GGTATTTTGC TTTGAGGGGG
CTGTCGGTTA TGCAAGCGGC TGCGTTGCAG CTGCTTGTGC CTATTATTGC CGCAATTGGT
GGTGTGATAT TTTCCAGTGA AGCGATTACG ATACGGTTGG TTATCTCATC ACTTGCCGTG
TTAGGTGGGA TTTTACTTGT GCTGTTGGGG CGTCAGTATC TACATCCCTC TAGTGGAAAA
GAGGTGTAA
 
Protein sequence
MKSPTQLKVI LATTFALLAF AGNSVLCRLA LGDGAIDAAS FTIIRFLSGS LVLVFILLLT 
RLIKQQSPYK EQKRSTGRGS WLAGFMLFLY GVTFSYAYIS LDTGMGALIL FGAVQLTMIL
ISLLSGNRLH YFEWTGVVIA FSGFVYLVLP TLSTPSMTGF ILMTLSGVAW GLYTVKGRGC
KDPILDTTYN FIRTLPFIAI LLLLTIQSAS LTQAGIIFAV LSGAIASGVG YALWYFALRG
LSVMQAAALQ LLVPIIAAIG GVIFSSEAIT IRLVISSLAV LGGILLVLLG RQYLHPSSGK
EV