Gene Swoo_4101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4101 
Symbol 
ID6118451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4981491 
End bp4982354 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID641635662 
Producthypothetical protein 
Protein accessionYP_001762452 
Protein GI170728426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACA AGACACGAGT ATTATGCGCG ACAGCGATGC TTCTACCATT TTTGACAACA 
GCCACTTCGG CTAAAAGTGC TGATCACAGC GTTTCAGATC AAGTGATCGA AAAACAGAGA
GCCGCACTGG CCGCCAATAC AAAAGGTAAA GGTTACGGCC CTCAGTCACC ACGTGACATT
GATACCATCC AAGGTAATAA CAAACGAGTA TTTGCTCAGG CTCCTGTCTT CTCACAAATG
AATCTATGCA ACATTCATTT CCACAAAAAT GCAGAGCATA AAGGTGGTGA ATTCACTAAG
TATGCAGGTA ATGGCGATGG CCACGGCTAC CACAGTGGTT ACCAATACTC AGGTAAATTA
TCCAAAGCTG AGCTAGCCCC ACTTAAACAT AAAGTCGGTG CAAGTAAACA TGGTAGCCTG
TATCCAGGAG ATACCATTGA AGTCCACTAT GTGCACTCAA CAGCCCAAGT CTCACCGGGA
GCAACCTTAG GCGCCTGCCT TAGCGATGCC AATAAAAACC CTCAACTCAG AGTGGAAACT
CAGGTCTATG TGTTAGTCAA CGATGCCAAG GCTAGTAACT TTATAACACT CACTGAGTTA
GGCATGAAGA ACGGATTAAA TCAGGCTCTC AATATTCCAA GCAATACCGG AACGCCTGTG
CAATATACAG GATCAACAAC AGGGCCAGGC TATAACGAAA AAGCCTCGCC GCTTCAGGTG
AGCTGGAGTG TTCGTCCTCA GGTGATGAAG GTCAATATTA ATAGTGTAGG TAAGTGGCTG
GAATCGAATG CTTTCGATGA AGATCATGCC CATGGCGTGA GAAATCTAGT GACGAATCCA
GATCTTCTCT CCGCTGCTCA CTAG
 
Protein sequence
MSYKTRVLCA TAMLLPFLTT ATSAKSADHS VSDQVIEKQR AALAANTKGK GYGPQSPRDI 
DTIQGNNKRV FAQAPVFSQM NLCNIHFHKN AEHKGGEFTK YAGNGDGHGY HSGYQYSGKL
SKAELAPLKH KVGASKHGSL YPGDTIEVHY VHSTAQVSPG ATLGACLSDA NKNPQLRVET
QVYVLVNDAK ASNFITLTEL GMKNGLNQAL NIPSNTGTPV QYTGSTTGPG YNEKASPLQV
SWSVRPQVMK VNINSVGKWL ESNAFDEDHA HGVRNLVTNP DLLSAAH