Gene Swoo_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4097 
Symbol 
ID6118447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4977312 
End bp4978511 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content40% 
IMG OID641635658 
Producthypothetical protein 
Protein accessionYP_001762448 
Protein GI170728422 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGA TAACTCAAGT CACTAATACC CCAGAAAATC ACAGTACAAC ACCTGTACGT 
AACGCAAATA TTGATGCAAT TCGTGGACTC GCAGTACTGG GGATCTTGTT TATGAACATC
TATTACTTTG GCAACGCCGT TTCTGGTTAC GCCAGCCATG AGATCTCCCC ATTTCATGAC
ACCTTAGTGG AACTATTTAG TAATTTTTTT CTTGAAGGGC GCTTTATCAG CCTATTTGCA
ATGTTATTTG GTGTTGGCTT AGCGGTTCAG TTCAATCGGT ATTCTAAACA GAATATTGAC
GCCTATAAGC AGATAAAATC ACGATTGAAG TGGCTATTAG TTTTTGGCGC CGTGCATGGG
ATTGTTATCT GGTCTGGTGA CGTGCTGTTT GCTTACGGGC TCAGTGGTTT TTTAGCCCTT
TGTTATCTGA AACTTGATAA CGATAAACTA ATAAAAAAAT CACTGCTGTT TATTGCCATC
TCTGTGTTTA CTTTTACTCT TTTTAGTATC TTCTCTCCCG AAGAACGATT TATTCGAGGG
TCTGAGCTAT TTGAAGAGGA GTACTTAATA TGGTTCAGCA CTTACTCTGA ACAACTATTG
ATGCAACTTT TTGTTTTTAT TACTTTGTTA TTTTTTATTC CGTTAACACT AATGTGGTTT
TCAACAGGCT TGATGCTGCT TGGCGTGGCA CTTTATCGTA AGGGCATTTT CCAGCAAGGA
TTTAGCAAGC GGCATCTTAT CTGGTTTGCT TTGGCGAGTA TCTTTTTCTC TACTCTAGAT
AGCCTACTCT CCTTTTCTGA AAATCCAATA TTACATACCT TATCGGGCGT CATCGTACTG
CTCAGTGCAA TTCCGATGGC GCTAATTTAC ATGCATCTGC TGATAAAAAT ATGCCAAAAT
CGCTCAACAG TGTTAGCACC ACTACAAAAG GTTGGTCGAC TTGCCTTCAG CCTATACATA
TTGCAATCAA TTTGCGGAGT ATTGCTGTTT CGTCACTTTG AGCCAACTCT GGTAAACACA
CTAGATAGAC CTGACTATAT GCTAATAGCT ATTGGCTACT CAATTCTGCA GCTTATTCTG
GCCACCATAT ACTTTAACTA TTTCAATCAA GGGCCATTAG AGAAACTGTG GAGAGGACTA
GCAAAAGCTA AACCAAATGC TGCTCAAGAA AACGATCAAC TGCTAAATCA AAGGAGATGA
 
Protein sequence
MESITQVTNT PENHSTTPVR NANIDAIRGL AVLGILFMNI YYFGNAVSGY ASHEISPFHD 
TLVELFSNFF LEGRFISLFA MLFGVGLAVQ FNRYSKQNID AYKQIKSRLK WLLVFGAVHG
IVIWSGDVLF AYGLSGFLAL CYLKLDNDKL IKKSLLFIAI SVFTFTLFSI FSPEERFIRG
SELFEEEYLI WFSTYSEQLL MQLFVFITLL FFIPLTLMWF STGLMLLGVA LYRKGIFQQG
FSKRHLIWFA LASIFFSTLD SLLSFSENPI LHTLSGVIVL LSAIPMALIY MHLLIKICQN
RSTVLAPLQK VGRLAFSLYI LQSICGVLLF RHFEPTLVNT LDRPDYMLIA IGYSILQLIL
ATIYFNYFNQ GPLEKLWRGL AKAKPNAAQE NDQLLNQRR