Gene Swoo_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4095 
Symbol 
ID6118445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4974556 
End bp4976343 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content40% 
IMG OID641635656 
Producthypothetical protein 
Protein accessionYP_001762446 
Protein GI170728420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG ATGTTGTTGA TTTTAGATTA TCTATGTTGC TGCAAGTTTT ATTGCTCAAT 
CTACTATTGG TATCACTGTC TTCACAGGCT AAGGAAGCCC AATTAGTGCA AACTATTACA
GTCCCTTTGT ATGAAAATCT CTCGTTAGAC TTACCTGTAA CCGGTGAATT GTCATCTTGG
AGTTCAGGCT ATTATGTTTG GAGAGTTGAT CAATTATTTA TCGATCTCGA TAAAGATAAA
GTTTGGACAA TTAACCCATT CAGTCTTGAT ATCGTGATTA GTCAGGCACC TAGAGAAGAT
TTCAATTACT CACGCTGGCG GCAAGGCATT GTAGATTCAG GTGCACTCGT GATACGAGAA
GATGCCCATG GCATGCTATA CCAGTCTGGT GGGGCTTTGC ATATTCTGAC CCATTATTAT
ACGGGAAAGG AGCATGTACT GGGTAAAGCG ACCCTATTTG ATGTTGAAGA TCTTAACCAA
GCGAATATTT CTTATGAGGT GCTCTCCTCT TTTATTCCAA AGCATGTATA CCAAGGGTAT
CAAAGTCGGT TTGTGACTCC ACTTGATATC AAGACAACGT TAGCCAATAT GCCAATAACC
ACCGAACCTT GGCTAGCCAA GGCACTCTCT GACACTATTC CTAGCTATTT GAATGGTAGA
GCATTACTCA GTGCCGATAC TCAGAATTGG AAGCCAGTGG ATACTAAACA ATCTAAAATT
CCGTTGAAAA TCTATGCTGA AACAGAGTTA GGTACTCTTG AATACTTTGC TGATACTGCT
CAAGAGGATG GTTGGAGTGT AGCCTTTATT GGAGAGAATC AAGATAAGAG CAAAGTTAAT
CGTCTCACCC TGCAAAACAT GAGTAACCCA ACTCAATATT TTAGTTATTG CTTAGTGGAG
GCTAAAGGGG TTGAATTAAT ATTGTCGGCA TCTGAAGATG TCCATTTTAG ATATATGAAA
TTAGCCGAGC AGTTATCGTT TATTCACCAA TGTCAGTTAT TGGATATCGG TGACATGATC
CCAGAATTAC ATCTGCCACA ATTAACAACA ATCATAAAAC CTCAGCTGTT TCGTTACAGT
AAAATAGAGC CATTAATTAC ACCTAAAGGC TGGCTAAAAG TATTTGATAA AACGAATAAT
CCTGACAACT TCTTTTGGGG AGCCGTAGGG GTATTGGACG CTGATAGCAA AGTTATTATC
GAGCCTAAAT TTGAAGAGAT TGAGTTTATA GATAACTTTT TTCTCGCCAC CAAAAAAAGC
GGTAAAGTGT TAATCAGTTT CAATGGTAAC CCTCTTATAG AGGGGAGCGA TTTTACCTCC
TTGTCTGCAG GAAAGTTTTT AGTGACACAA GAAGAAGGTG AACAGAGTGA GATGGGGGTT
TTCGATGCCA ACAACAATGT TTGGCTTATG GCGCCAGCTC TTCATGATTT AAGACCGTTT
GAAAATACTC AATGGCTTCA GCAACGAGTA ACGATATCTG GTACAAATGG GGTAAAGCAA
TTGAGCTATT ATGGCCTTGT TGAGCTTGAT GGGAGGGTTG TTGTTCCACC AGAGTTTCAA
TCCCTTTGGT TAAATCGTTT ACTGGATGTC ATTGTCGTGC AGCAAATCAG TATAGATACT
CAGAATCATT GGCGTTATCG ATATGGAGTC TATAAGTCAA ATGGTGAGTT GATAATGCCA
GTTATTTATG ATGGATTAGA GCAAGAGATG GGAGCGGTTA TCAAACTCAG GAAAGAGGGA
GAATGGTGGC AATACCCTGA CAGCTCAAAA CTCAATAATG CCAACTAG
 
Protein sequence
MNIDVVDFRL SMLLQVLLLN LLLVSLSSQA KEAQLVQTIT VPLYENLSLD LPVTGELSSW 
SSGYYVWRVD QLFIDLDKDK VWTINPFSLD IVISQAPRED FNYSRWRQGI VDSGALVIRE
DAHGMLYQSG GALHILTHYY TGKEHVLGKA TLFDVEDLNQ ANISYEVLSS FIPKHVYQGY
QSRFVTPLDI KTTLANMPIT TEPWLAKALS DTIPSYLNGR ALLSADTQNW KPVDTKQSKI
PLKIYAETEL GTLEYFADTA QEDGWSVAFI GENQDKSKVN RLTLQNMSNP TQYFSYCLVE
AKGVELILSA SEDVHFRYMK LAEQLSFIHQ CQLLDIGDMI PELHLPQLTT IIKPQLFRYS
KIEPLITPKG WLKVFDKTNN PDNFFWGAVG VLDADSKVII EPKFEEIEFI DNFFLATKKS
GKVLISFNGN PLIEGSDFTS LSAGKFLVTQ EEGEQSEMGV FDANNNVWLM APALHDLRPF
ENTQWLQQRV TISGTNGVKQ LSYYGLVELD GRVVVPPEFQ SLWLNRLLDV IVVQQISIDT
QNHWRYRYGV YKSNGELIMP VIYDGLEQEM GAVIKLRKEG EWWQYPDSSK LNNAN