| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4086 |
|---|
| Symbol | |
|---|
| ID | 6118436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4957666 |
|---|
| End bp | 4958505 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635647 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001762437 |
|---|
| Protein GI | 170728411 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.778722 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGAGC GAATTGTTCA AGAGACTGAA ATACTTAAGG TCGATAACTT AAGCTGGCAT
GCCGATGAGC GTGAGATCTT ATCCGGTATC CACTTCTGCC TAACAAAAGG GGAGATGTTA
GGGATCATTG GTCCCAATGG TGCCGGTAAA TCCAGCCTGC TGCGCTGTCT CTACCGATAT
ATCAAACCAA GCTCAGGCGC AATTACCCTT TTTGGTGACG AGATAGCAAC GCTATCAGCA
AAGGAGTTTG CTAAGCGAGT AGCGGTTGTA CTCCAGGACA CGCCACACCA TTTTGACCTG
ACCACAGCGC AGCTGGTGGC TATTGGGTTA ACTCCCCATA AGGGGCCTTT TGAGATAACC
ACAGCTAAAG ACAGAGAGGT TATCAATGAT GCGCTAGCAA AAGTGGGGTT GACCCATAAA
GCTGGGCAAG CTTATGAGCA CCTTTCCGGT GGTGAAAAGC AGCGTGCCTT GATTGCCCGG
GCGATAGTGC AACGACCTAA ACTGCTGATT TTAGATGAGC CTACCAATCA TCTAGATATT
CGTTATCAGA TACAGATCTT AGAGCTGCTT CGAAGCCTTA ATATTTCAGT TATCACCTCT
ATTCATGATC TAAATCTTGC CAGTGCCCTG TGTGATCAGT TGCTGTTATT AGATGGAGGA
AAGTGTATCT CCCATGGCGC ACCTGTAGAG GTGTTAACTG AGCAGCGAAT TGGGGACGTG
TTCGGTGTCT GCTGTAAAGT CGAGCCGCAT CCTCAACATG CCAATCCTCA GATCAGCTAT
TTTTATGGCT ACTCCTCAAT TAAAGAGAAG CAAGGGAGGC AAGATGACAG TGGCAGTTAA
|
|---|
| Protein sequence | MIERIVQETE ILKVDNLSWH ADEREILSGI HFCLTKGEML GIIGPNGAGK SSLLRCLYRY
IKPSSGAITL FGDEIATLSA KEFAKRVAVV LQDTPHHFDL TTAQLVAIGL TPHKGPFEIT
TAKDREVIND ALAKVGLTHK AGQAYEHLSG GEKQRALIAR AIVQRPKLLI LDEPTNHLDI
RYQIQILELL RSLNISVITS IHDLNLASAL CDQLLLLDGG KCISHGAPVE VLTEQRIGDV
FGVCCKVEPH PQHANPQISY FYGYSSIKEK QGRQDDSGS
|
|---|
| |