| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4081 |
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| Symbol | |
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| ID | 6118431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4952392 |
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| End bp | 4953975 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635642 |
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| Product | cobyric acid synthase |
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| Protein accession | YP_001762432 |
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| Protein GI | 170728406 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.495861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCA AAAAGAAGAT TGAATCAGAT ACAGCAGTTC CAGCTCAAGT GCTTATGGTA
CAGGGTACCA CTTCAGATGC CGGCAAAAGC ACCTTAGTCG CAGGTTTGTG CCGTTTGTTT
GCCCGTCGCG GTGTTAACGT TGCTCCCTTC AAGCCACAAA ATATGGCGCT TAATAGTGCG
GTTACTGCCG ATGGTGGTGA GATTGGCCGC GCCCAAGCGC TGCAAGCGAT AGCCTGTGGT
TTACCTCTGC ACACAGATTT TAACCCTATT TTACTCAAGC CCAGTTCTGA TACGGGTGCT
CAAGTTATCG TGCAAGGTCG AGCCTTAGAT CAGATGGAAG CTAAGACCTT TTTTGGTCAA
GATGGCGAGC GAATAAAAGA GAAGGGGGGC TACCGAGTCA AGGCGATGTC GGCAGTACTC
GACTCCTTTG AGCGTTTATC TAGAGGTTAT GACACTTTGT TTGTAGAGGG TGCTGGTAGC
CCTGCTGAGA TTAATCTGCG TGAAGGTGAT ATTGCTAATA TGGGCTTTGC CGAAGCGGTA
GATTGCCCTG TGATCATCAT AGCTGATATC GACAAAGGTG GTGTGTTTGC TCATATGGTT
GGCACTCTCG CGCTGCTTTC TGAGTCTGAG CAGGCTAGGG TTAAAGGGTT TGTGATTAAC
CGTTTTCGCG GCGATATTGC ACTGCTGCAA TCTGGACTCG ATTGGCTGGA GTTCTACACG
AATAAACCTG TGTTAGGTGT GTTGCCCTAT TTACATGATC TGCATTTGGA CGCTGAAGAT
GCCTTGGTGG CATCGCCTGT TAAATCCCAA AACAGCAAGC TTAATGTCCT TGTTTTAGTT
TTTCCTCGCA TCAGTAATCA CACCGATTTT GATCCCCTTA GGTTGCACCC GCAGATTGAG
TTTAACTATG TCTCAGTGCA AACTCTGTCT CAATCTCCAT TAACTTCTGG AGAACTACCT
CAAGCCGATC TGATCATACT ACCGGGCAGT AAAAATGTTC GGGCTGATCT GGATTTCATG
CGTGAGCAGG GCTGGGATAT CGCGCTGGCT AAACATCTTA GGTATGGTGG TAAGGTGATG
GGGATCTGTG GCGGATATCA GATGTTAGGC TTGATGATTG ACGATCCTAG TGGGGTTGAA
GGTGAGGTGG GTGATACAGA AGGGTTAGGT TACCTCTCAC TCGTAACAGA GCTTAAGCCA
GACAAGGTGT TAAGACAGGT CACTGGTGAG CTCTCTTTGT TAGGGGAGCA GGCAGCAGTG
AAAGGCTACG AGATCCATTG TGGCGAGTCC CAAATATTAA ATCCTGATCT GAGTCAAAAC
TCTCCGTTTA GCCTCACCGT TGAGAGTGAA GCTGAAGAGT TTAGTGATGG CATGCTCACT
AAAGACAACC AAATTTTAGG CACCTATCTT CATGGTGTGT TTGACTCGCC TCAGGCTTGC
ACTCTTATCC TCAAATGGGC GGGATTGAAT CATGCCCAAG TGGTGGATAT CGATGCCATC
CGTGAGGAGC AACTTAATCG GTTTGCCGAT CAGCTAGAGA AAAGTTTAGA TATAGAGAAG
ATAGAAGAGA TTTTAAGATC GTGA
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| Protein sequence | MSPKKKIESD TAVPAQVLMV QGTTSDAGKS TLVAGLCRLF ARRGVNVAPF KPQNMALNSA
VTADGGEIGR AQALQAIACG LPLHTDFNPI LLKPSSDTGA QVIVQGRALD QMEAKTFFGQ
DGERIKEKGG YRVKAMSAVL DSFERLSRGY DTLFVEGAGS PAEINLREGD IANMGFAEAV
DCPVIIIADI DKGGVFAHMV GTLALLSESE QARVKGFVIN RFRGDIALLQ SGLDWLEFYT
NKPVLGVLPY LHDLHLDAED ALVASPVKSQ NSKLNVLVLV FPRISNHTDF DPLRLHPQIE
FNYVSVQTLS QSPLTSGELP QADLIILPGS KNVRADLDFM REQGWDIALA KHLRYGGKVM
GICGGYQMLG LMIDDPSGVE GEVGDTEGLG YLSLVTELKP DKVLRQVTGE LSLLGEQAAV
KGYEIHCGES QILNPDLSQN SPFSLTVESE AEEFSDGMLT KDNQILGTYL HGVFDSPQAC
TLILKWAGLN HAQVVDIDAI REEQLNRFAD QLEKSLDIEK IEEILRS
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