Gene Swoo_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4060 
Symbol 
ID6118410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4931630 
End bp4932061 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content46% 
IMG OID641635621 
ProductUspA domain-containing protein 
Protein accessionYP_001762411 
Protein GI170728385 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCA GACAAATACT CTGTCCAACG GACTTTTCCG AAACAGCATC TCATGCATTA 
AGATACGCTA TTGAAATGGC CAATTTTTAT CAAGTAGGGT TGAGATTAAT CCATGTAGTG
GATCAGCCTG TTGGTGCTGA AAACTATCAG ATACTCGCCA TTACTCCCGA GGAACTGGCT
AAGAGCATGG AGGACGCGGC TGCAGATAAG ATGCGGCATC TGCTCTCTGA TTTAAAAAGT
GAGCTACCGA TGGAAACCGT TATTAGGCGG GGCTCTCCCA TTGAGGAGAT CTTAGCCGAT
GCGGTTGAGT TTGATGTTGG AATGATAGTC ATGGCTAGCC ATGGTCGTAG CGGTTTATCA
CACTTTCTAC ACACCAATGT CGCTGAAGGG ATCGCAAATC GTGCTAAATG TCCGGTCTTA
GTGGTGAAAT AA
 
Protein sequence
MRTRQILCPT DFSETASHAL RYAIEMANFY QVGLRLIHVV DQPVGAENYQ ILAITPEELA 
KSMEDAAADK MRHLLSDLKS ELPMETVIRR GSPIEEILAD AVEFDVGMIV MASHGRSGLS
HFLHTNVAEG IANRAKCPVL VVK