Gene Swoo_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4055 
Symbol 
ID6118405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4927880 
End bp4928932 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content47% 
IMG OID641635616 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001762406 
Protein GI170728380 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA ACCTTTTTCA AACTTTTGCG CTCAACGAGA CCATTACCCT GCAAAATCGC 
ATTTTGATGG CACCACTGAC CCGCTGCATG GCTGATGAGG AGCTAGTACC GACTCAGGCG
ATGGCGGATT ATTACGCTCG ACGTGCAGAA GCTGGACTTA TTATCTCTGA AGCCGTGATT
ATTCGCCCTG ACGGTCAAGG TTATCCCAAT ACTCCTGGTC TGTTTTCCTC TGCGCAGATA
GATGGCTGGC GAGTGGTGAC TGATGCGGTA CATCAAGGTG GGGGTAAAAT ATTTGCCCAG
CTATGGCATA CAGGCCGAGT TGCTCATCCA CACTTTTTTA AGAAAACAGG ATCAACAGAT
GTCTTAGCTC CCTCTGCAGT AGGTGTTGAG GGAAGTGTGC CAAGAATGCG TGAGTTGAGC
TATCAAGTGC CTAAAGCCGT GACCCATGAA GATATTGCTC AGCTTGTTGC TGATTATTCA
CAAGCAGCGT CAAATGCAAT AGATGCAGGT TTTGATGGTG TCGAGATCCA TGGCGCTAAC
GGGTATTTAC TTGATCAGTT CCTGCATCAT GACAGTAACC ATCGCCAAGA TGAATATGGC
CAAACGCCTG AAAATATGGC TCGCTTTGCA CTGGAGGTTG TGGATGCAGT TGCCCAGCGT
ATCGGTAATG AAAGAACTGC GCTGCGAGTC TCGCCAGGTG CTTATTTCAA TATGGCCAGT
GATGAGCGTG ATCGCGCAGT TTTCGATTAT CTTCTTCCTC AACTTGAGCT GAGAAACTTA
GCCTTCCTGC ATATCGGTAT TTTTGATGAT GCCATGAAGT TTGATTATTT GGGAGGCAGC
GCATCTGCTT ATGTTCGTAG TGTGTATAAC AAGACACTGG TGGGTGTCGG AAGCTATAGC
GCCGAGTCCG GTAGCAGTGC CATAGCTCAA GATAAGTTTG ATCTTCTTGC TATTGGCAGA
CCCTTTATCG CAAATCCAGA TTACGTATCT AGAGTCCGTG AGGGTAAGGA GCTCGTTGAA
TACTCAGATG AGATGTTAGC GAACCTAGTT TAG
 
Protein sequence
MTDNLFQTFA LNETITLQNR ILMAPLTRCM ADEELVPTQA MADYYARRAE AGLIISEAVI 
IRPDGQGYPN TPGLFSSAQI DGWRVVTDAV HQGGGKIFAQ LWHTGRVAHP HFFKKTGSTD
VLAPSAVGVE GSVPRMRELS YQVPKAVTHE DIAQLVADYS QAASNAIDAG FDGVEIHGAN
GYLLDQFLHH DSNHRQDEYG QTPENMARFA LEVVDAVAQR IGNERTALRV SPGAYFNMAS
DERDRAVFDY LLPQLELRNL AFLHIGIFDD AMKFDYLGGS ASAYVRSVYN KTLVGVGSYS
AESGSSAIAQ DKFDLLAIGR PFIANPDYVS RVREGKELVE YSDEMLANLV