| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4050 |
|---|
| Symbol | |
|---|
| ID | 6118400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4925219 |
|---|
| End bp | 4925587 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641635611 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001762401 |
|---|
| Protein GI | 170728375 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG TTATGAATAT GAAAAAATTC TCTGAGCGAG CAGGTCTGTC AGCACATACA
CTGCGTTATT ATGAAAAAAT TGGCCTACTC AACAACGTCC AACGCAATAT TAGTGGTCAT
CGAGATTACA CCAGCAGAGA TCTGGATTGG ATTAATTTTG TTATTCGTCT GAAAGACACT
GGTATGCCTT TGAGCAACAT TTTGGAATAT GCCAAGTTAC GAGCATTAGG TTCGGATACG
GTTAAAGAGC GTCAGAAGCT ACTTGAACAA CATAGAGAGT GTTTAAAGTC TCATATTGAG
CTACAGCAAA ATCATCTCGC AGCCCTAGAG GATAAGATTG GTTTATATGA ATTGAATAAA
GTGAGTTGA
|
|---|
| Protein sequence | MANVMNMKKF SERAGLSAHT LRYYEKIGLL NNVQRNISGH RDYTSRDLDW INFVIRLKDT
GMPLSNILEY AKLRALGSDT VKERQKLLEQ HRECLKSHIE LQQNHLAALE DKIGLYELNK
VS
|
|---|
| |