Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4049 |
Symbol | |
ID | 6118399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4924757 |
End bp | 4925161 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635610 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001762400 |
Protein GI | 170728374 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACT CAAGATTTAC AGTAGGTCTA GAGCAGCTGT CTAAAATCGA TGGTGAGGCA GGTCATAATG TCATCGAAAG TCTGCAAGAT ATCTGTCCCG ATCTGGCTAA ATTCACCATT GAATATCCCT TCGGGGATAT ATATTCACGG CCAGCTCTAG ATTTAAAGTC CAGAGAGATA GCCACCATTG CCGCCTTAAC GGCATTAGGT CATTGTAAAC CTCAACTGAA AGTACACCTT AATGCGGCTT TAAATGTCGG CTGCACAGAA GATGAGATTA AAGAAGTACT ATTACAGATG ACAGTTTATG CAGGCTTCCC CGCAGCATTA AATGGCATGT TCGCATTTAA AGAGGTACTT CAAGAGAGTA AAGCAATTCA ACCAAGCAAT GACCTTGATA CTTAG
|
Protein sequence | MENSRFTVGL EQLSKIDGEA GHNVIESLQD ICPDLAKFTI EYPFGDIYSR PALDLKSREI ATIAALTALG HCKPQLKVHL NAALNVGCTE DEIKEVLLQM TVYAGFPAAL NGMFAFKEVL QESKAIQPSN DLDT
|
| |