| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4040 |
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| Symbol | |
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| ID | 6118390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4917240 |
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| End bp | 4918313 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635601 |
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| Product | regulatory protein |
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| Protein accession | YP_001762391 |
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| Protein GI | 170728365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAAAA AAATAGATAA TCAAACCGTC AACATTGGTG TACTGTTGCC CTTTAGTGGT
CCCATAGGGC TTTGGGGGAA CTCTTGTGAA GCCTGCTCTA TATTGGCCGC TGCAGAATTG
AATAGCTACC GTGGGATACT CGATTGTAAG GTTGAACTAG AGTTTATTGA TGCCAGTCTC
AAGCCTAGTA ACGTGGTCAA AGAGGTCTCT GCTAAGGTGA ATTCTGGTCA ACTATCTGCT
TTAGTTGGTA CTCACACCAG TGATGTTCGT AAAGAGGTTG CCAATGCCAT TAAAGGTAAG
GTGCCTTACA TCTATACCCC TATGTATGAG GGCGGTGATC AAGGTACTGG CATGTACCTT
ACAGGGCTCA CCACTGAGCA AAGTGTGTTG CCGACTTTAG ATTGGCTCTG CTCCAATGTC
ACATCTCAAC GTTGGTTTTT TGTGGGGAGT GACTATATTT GGCCAGCTAA AACCCATTCC
TCTGCTATCG ATTTTTTGTA TTCCAGACAT AGAGAGGTAG TCGCGAATGA ACTGTTGCCA
CTGAAATGCA AGGACTTTTC TAGTACACTT GAGCGTATAG AGCAGAGCAA ACCTGATGTT
GTGTTTATTA ATTTACTTGG TGAAGGAGCC ATTGATTTTA ATCGACAGTT TGCTCAGCGA
GGGTTAGATA GCCAAATCAT CCGATATTGT GGTGCGATCG AAGAGAACAT GTTGTATGCG
GTTGGTAGTG AAAATAGTCG TAATTTATTT TCATCAATGG GCTATTTCGA AGGCTTAAAA
ACTAACGAAG CTCAAAACTT TAATAAGCTT TATTATAATA ACTTTGGTGA TTTGGCACCT
GGGCTTAATC AGATCAGTGT TTCGAGTTAT GAAGGGATCA TGTTGTTGGC TGACCTTGCG
CAGCGTAGTC AATCCTTACA GACTCACGAT ATAGAAAAAA CATCGATGTC GGCAGTTAAC
TTTCACAGTC CAAGAGGTGA GATAACCTTA TTAAATAAAA ATGTACAGGC AGATGTGTTT
ATTGTCCAAG CGAAAGATAA TAGATTTGTA CCTTTGCATC GTATTGGTTA TTAA
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| Protein sequence | MHKKIDNQTV NIGVLLPFSG PIGLWGNSCE ACSILAAAEL NSYRGILDCK VELEFIDASL
KPSNVVKEVS AKVNSGQLSA LVGTHTSDVR KEVANAIKGK VPYIYTPMYE GGDQGTGMYL
TGLTTEQSVL PTLDWLCSNV TSQRWFFVGS DYIWPAKTHS SAIDFLYSRH REVVANELLP
LKCKDFSSTL ERIEQSKPDV VFINLLGEGA IDFNRQFAQR GLDSQIIRYC GAIEENMLYA
VGSENSRNLF SSMGYFEGLK TNEAQNFNKL YYNNFGDLAP GLNQISVSSY EGIMLLADLA
QRSQSLQTHD IEKTSMSAVN FHSPRGEITL LNKNVQADVF IVQAKDNRFV PLHRIGY
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