| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4038 |
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| Symbol | |
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| ID | 6118388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4913254 |
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| End bp | 4914768 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635599 |
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| Product | amidase |
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| Protein accession | YP_001762389 |
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| Protein GI | 170728363 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTA CAGGCCCGAC AATAACCGAG TTAAATTTGA TCGCTAAAAG CCTCTGTATG
GATTTATCAG ACTCAGATTT AGAATTACAC CTGTCGTTAT TACAACCAAA CCTTGCAGCT
TATGAACTCA TCGACTCACT TCCCGATAAC GTCCCTTTTG TCACTCATCC TCGAACAAGC
GGCTATGAGC CAGATCTCGA ACAAAATGAA CTGAATGCTT GGCATAGAAA GGTATCAATT
AAAGGAGAAA AGTCTGGCTT ATTAGCTGGA TACAAAGTTG TTTTAAAGGA TAATATTTTT
CTTGCTGGAG TACCGATGAA CAATGGAGCA TCAACATTGC AAGGATATAT TCCTGAATAT
GATGCAACGG TAGTAAGTAG GATCCTCAAC GCTGGGGGCG AAATTGTTGG TAAAGCCCAC
TGTGAATATT TCTGCTTATC CGGTGGAAGT CACACCAACA GCAAGCACTC AGTCAAGAAC
CCATACAATC CGCTGCATTC TAGTGGCGGC TCCTCCTCTG GCTGTGGCGC CTTAGTTGGA
GCAGGGGAAG TGGAGATGGC AATAGGCTGT GATCAAGGGG GATCCATTAG AATTCCCGCC
TCTTGGTCTG GTTGTGTTGG CATGAAACCC ACCTGGGGTC TAGTTCCTTA CAGTGGAATA
ATGCCTATTG AAAATACCAT CGATAATGCT GGGCCTATCA CCAATAATGT GGAAAACAAC
GCTAAATTAT TACAAGCCAT AGCGGGTCAT GATGGCCTAG ATCCAAGGCA ATATCGGCAG
GGAGTCGATG ATTATCTTAC CAGTTTAAAG TCCAATATAA ACGATCTTAA AATCGGCATA
TTAACTGATG GATTTAACCG TCCAGAATCA GAAGAAGACG TCGATAAAGC AGTGTTAGAT
GCCATACAAG TGCTTTCAAA ACTTGGCGCC AGTATTGATG AAGTATCCAC CCCTTGGCAT
AACATTGGAC AATCTATTTG GCTAGCTGTG GCACTTGAAG GCTTAACCGA CCAGATGATG
CTAGGCAATG GCATGGGGCG TGGCTGGAAA GGCTTGCACA GCACCAGCTT AATTGACCGC
CATTCAAGCT GGCGTATGCG AGCTAATGAA CTACCAAATA ATCTAAAGTC TTGCCTACTC
ACCGGCCAGT ACATGCTTGA GAAATATAAT GGCCACTTCT ATGCAAAAGC ACAGAACCTA
AGCCGCCGTT TAACCGATGA ATATGACAAG CTTCTGTCAC ATTTTGACAT CTTAATCATG
CCAACTACCC CCATGAAAGC AACACCAATC CCGACTGCTG ACGATGATGA GGCTCTGCAT
GTGCAGCGAG CCTTTGAAAT GATAGGTAAC ACCAGTCCAT TTGATACCAC TGGCCACCCG
GCATTATCTA TACCCTGCGG AATACGAAAC GGTTTACCCG TTGGAATGAT GTTAGTTGGC
AATCATTTTG ATGAAGCAAC CCTGTACCGG GCTGCACAAG CCTATGAGCA AAGTACAGAT
TGGAAGGCCG TTTAG
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| Protein sequence | MAITGPTITE LNLIAKSLCM DLSDSDLELH LSLLQPNLAA YELIDSLPDN VPFVTHPRTS
GYEPDLEQNE LNAWHRKVSI KGEKSGLLAG YKVVLKDNIF LAGVPMNNGA STLQGYIPEY
DATVVSRILN AGGEIVGKAH CEYFCLSGGS HTNSKHSVKN PYNPLHSSGG SSSGCGALVG
AGEVEMAIGC DQGGSIRIPA SWSGCVGMKP TWGLVPYSGI MPIENTIDNA GPITNNVENN
AKLLQAIAGH DGLDPRQYRQ GVDDYLTSLK SNINDLKIGI LTDGFNRPES EEDVDKAVLD
AIQVLSKLGA SIDEVSTPWH NIGQSIWLAV ALEGLTDQMM LGNGMGRGWK GLHSTSLIDR
HSSWRMRANE LPNNLKSCLL TGQYMLEKYN GHFYAKAQNL SRRLTDEYDK LLSHFDILIM
PTTPMKATPI PTADDDEALH VQRAFEMIGN TSPFDTTGHP ALSIPCGIRN GLPVGMMLVG
NHFDEATLYR AAQAYEQSTD WKAV
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