Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4037 |
Symbol | |
ID | 6118387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4911410 |
End bp | 4913086 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635598 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001762388 |
Protein GI | 170728362 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0518356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAGG ACTTAACAAG ACAAAGTTAC AAAGAGGGGG AGGGGGACGC AGTGTTTATC AATGGCACTA TTGGGCAGAC TTTTGATTGT ATCGCTTCAC AACATCCTAA TGCGCAAGCC ATTGTTGTTA AACATCAAAA TATCTCTTGG AACTACAGGC TGTATCACCA AAAGGTGACT CAGTTCGCCG CGGGATTGCT ACAGCTTAAT GTTAAACCCG GTGATAGAGT TGCTATTTGG GCCCCTAACT GTATTGAATG GTGTATTGCT CAGTTTGCCA CTGCAAAAAT CGGTGCTGTA TTGGTGTGCA TCAATCCGGC ATATAGGATC TCTGAACTGT CATATTCGCT AAAGAAAGTT GGCTGTAAAG TATTGATCAC CGCTACAAAC TTCAAATCTT CCGATTACTT AGAAATGATT GAAACCATAG TGCCAGAACT TAAGTTATGT TCGCCTGGAG AGCTTACTTC TGAAAACTTC CCATTGTTGA AAAGTGTTAT TCAGATGGGC GATAAAAGCC GTTCTGGTAT GTTTGGTTTC GATGAGGTGA GTGATTACTG CACTGATGAA TTGATTGAAA AAGTTAATAG CATTGGTCAG CGTCTTTCTC CTGATGATGC CATTAATATT CAGTTTACCA GTGGTACAAC GGGAGAGCCT AAAGGAGCAA CCTTGACTCA CAGTAGTATT TTGAATAATG GCTTTCAAGT CGGCGAAAAA ATGCGCTTAA CTTACGATGA TAAGCTATGT ATTCCTGTGC CGCTATATCA CTGTTTTGGC ATGGTAATGG GAAACTTAGC CTGCATTACC CACGGCTGTA GTGCGGTATT TCCCAGTGAC TCATTTGACC CTATTGCTTG TTTAGAGGCG ATAGATGAAT ACCGATGTAC CGCGCTTCAT GGCGTCCCAA CCATGTTTAT CGCCATTTTA AATGAGCCAG AGTTTAACGC ATATGATTTG ACGAGTTTAC GTACGGGGAT TATGGCGGGG GCATTATGCC CAATAGAGAC TATCAAGAAA GTTATCGGTG ATATGAATAT GAAACATATA CTTATCGCCT ACGGACAAAC TGAAACTAGC CCTGTTAGTC ACATGACGGG TATCGATGAT GCGATTGAGA AACGGGTTAC AACCGTGGGG AAAATTGGGC CTGGTTTAGA GGTAAAGCTG GTTAATCAAA ATGGGGAGAC TGTGCCAATA GGCGTGGAAG GGGAGATCTG TATTCGTGGC TATGCCGTGA TGAAAGGTTA CTGGGAAGAT GAGCAAAAAA CCAAAGAGAC AATCAGCCAA GATGGTTGGC TGCACTCAGG TGATTTAGGT GAGATGGATA ACGACAATTA CCTAAAAGTC ACCGGACGTA TGAAGGACAT GATTATTCGT GGTGGTGAGA ACATTTATCC TAGAGAGATC GAAAACTTTT TATATACGCA CCCGACCATT TTAGATGTAC AAGTCTTCGG TATAAAGGAT GATAAGTATG GGGAAAGTGT GTGCGCATGG ATAATATGTA AGAAGGATAG ATCATTGACG GTACAGGAGG TTCAAGATTT CTGTAAGGAC AGTATTAGTC ATTTTAAGAT CCCTGAACAT ATCTCTTTTG TGACCAAATT TCCGATGACA GTTACAGGAA AAATACAGAA ATTTGTGATG CGAGATATGA TGGAGAAACG ACATTAG
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Protein sequence | MEQDLTRQSY KEGEGDAVFI NGTIGQTFDC IASQHPNAQA IVVKHQNISW NYRLYHQKVT QFAAGLLQLN VKPGDRVAIW APNCIEWCIA QFATAKIGAV LVCINPAYRI SELSYSLKKV GCKVLITATN FKSSDYLEMI ETIVPELKLC SPGELTSENF PLLKSVIQMG DKSRSGMFGF DEVSDYCTDE LIEKVNSIGQ RLSPDDAINI QFTSGTTGEP KGATLTHSSI LNNGFQVGEK MRLTYDDKLC IPVPLYHCFG MVMGNLACIT HGCSAVFPSD SFDPIACLEA IDEYRCTALH GVPTMFIAIL NEPEFNAYDL TSLRTGIMAG ALCPIETIKK VIGDMNMKHI LIAYGQTETS PVSHMTGIDD AIEKRVTTVG KIGPGLEVKL VNQNGETVPI GVEGEICIRG YAVMKGYWED EQKTKETISQ DGWLHSGDLG EMDNDNYLKV TGRMKDMIIR GGENIYPREI ENFLYTHPTI LDVQVFGIKD DKYGESVCAW IICKKDRSLT VQEVQDFCKD SISHFKIPEH ISFVTKFPMT VTGKIQKFVM RDMMEKRH
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