| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4027 |
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| Symbol | |
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| ID | 6118377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4897907 |
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| End bp | 4899583 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635588 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001762378 |
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| Protein GI | 170728352 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATG ACGACCCCAT TACACTGGAA ATTATTCAAA ATTCATTACG ATCAATCAGT
GATGAGATGT TCTACACCAT AGCCAAGACG GCAATGAGTC CGATTATCTA TGAAGTATTA
GATATGGCGA CGGCGATCAC AGATCCCAAA GGAGAGTTAG CGAGTGCAGG CGCTGGAATT
CCTGCTTTTG TGGGGGCGCT GGACAAGTCT GTTAAAGCCA TTATCAACAA GTTCAAGCCT
GAAGGTATCA ATGATGGCGA TATATTTATC ACTAACGATC CTTACTATGG CGGCGTAACC
CATCTCAATG ATGTGGTGCT GATTAAGCCT GTATTTATGG AGGGGGAGCT CCTAGCGTGG
GCGGTGAATA TTGCCCATTG GAATGATGTT TCCGGTAAAT CTCCAGGCTC AATGTCTGTG
GATGCGACTG AGATCTATCA AGAGGGGATC CGTATTCCCG CCGTTAAGTT GTTCGTCAAT
GATGAACCGA TACTTTCGGT GTTTGATATG CTCACTGCAA ACTCTAGAAT GCCGGAATTT
CTAAAGGGTG ACCTATGGGC ACAGATATCG GCATTGAGAT TAGGGGGCAA ACGAATCCTG
AGTCTGGTTA ATAAATATGG TCGTTCCAGT TATGTCCATG CGGTGGAGAG TTATCTTGAA
TTGGGTCAAG CCATGGCAGA GAAAGCCATT AAGGCACTAC CTGATGGCAA GTATGAGATA
GATGAAGCTC AAGACGATGG CAGCCATCTA TCTGTTGCTA TCGAGGTATC AGGAAGCAAA
TTGGTTATCG ATTTAACTCA AGCGCCTATT CAGAGCCCTC TGCCTATTAA CCTCTCTAAA
GATGGCACCA TGTTGGCGTG TCAGATGGCG CTAATGGGCT TGATTGGTGA CCGGCAGCTT
GCGAATGGGG GCTGTTTCAG AGTGTTGGAC GTCAAAACTC GCTCAGGCTC TATTTATGAT
GTGCAAGCCC CAGGGCCTTG TGGGATCTAC TTTGAAACCA TGATCCGCCT TAATGATCTT
ATCTGGCGTT GCTTGGCAGA AAAAGTCACC GACACTCTGC CCAGTGGTAA CTTCTCTTCA
ATTTGCGCCA CCATTATGGG AGGAAAGCAC CCAGATACAG GACAACACTA CTCCATCATT
GAGCCCGAAA TTGGTGGTTG GGGAGCCGGA GATGGCTTTG ATGGTGCTAA TGCTATGTTT
TGCGCCATGC ATGGCGATAC GTTTAACTGC CCGGCAGAAA TTGCCGAAAC CCGCTACGGC
GTGACCGTAG GACAAGTCGC GTTGAATGAT GAAGATGCTG GAGCGGGTGA GTATCGAGGT
GGCAAAGGTG TGGTGATTGA CTATGTTATT CGCTCCGATA ATAGCTTCCT TACCTGTGCG
TACACACGTA ATAAAATAGC TCCGTGGGGG CTCAATAAAG GTGAGGATGG TAGTGTCAAC
CGAGTTGAGG TTATCCGCAC CAATGGCGAG ATTGAGGTGC ATGCGATGGC ATCTGAAGTA
ACCCTTGATA CAGATGATAT TGTGCGTGTC ATTACGGCAA ATGGGGCAGG CTTTGGGGAT
CCGAAAAAGC GTAAAACAGC GGCGTTAGTG GATGATATAA ATAATGGCTA TGTCAGCCTT
GAGTATGCCA AAGCTAAGTA TGGATTCGAT GCAACTCATG GAGGAAGTTA TGAATAA
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| Protein sequence | MFNDDPITLE IIQNSLRSIS DEMFYTIAKT AMSPIIYEVL DMATAITDPK GELASAGAGI
PAFVGALDKS VKAIINKFKP EGINDGDIFI TNDPYYGGVT HLNDVVLIKP VFMEGELLAW
AVNIAHWNDV SGKSPGSMSV DATEIYQEGI RIPAVKLFVN DEPILSVFDM LTANSRMPEF
LKGDLWAQIS ALRLGGKRIL SLVNKYGRSS YVHAVESYLE LGQAMAEKAI KALPDGKYEI
DEAQDDGSHL SVAIEVSGSK LVIDLTQAPI QSPLPINLSK DGTMLACQMA LMGLIGDRQL
ANGGCFRVLD VKTRSGSIYD VQAPGPCGIY FETMIRLNDL IWRCLAEKVT DTLPSGNFSS
ICATIMGGKH PDTGQHYSII EPEIGGWGAG DGFDGANAMF CAMHGDTFNC PAEIAETRYG
VTVGQVALND EDAGAGEYRG GKGVVIDYVI RSDNSFLTCA YTRNKIAPWG LNKGEDGSVN
RVEVIRTNGE IEVHAMASEV TLDTDDIVRV ITANGAGFGD PKKRKTAALV DDINNGYVSL
EYAKAKYGFD ATHGGSYE
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