Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4026 |
Symbol | |
ID | 6118376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4897114 |
End bp | 4897914 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635587 |
Product | hydantoin racemase |
Protein accession | YP_001762377 |
Protein GI | 170728351 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.997842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACC AAAGTAAAAT TCGCATTCGC TGGCTCAACC CTATTGCTCA ACCTCATTAT GATGAACCTA TGGGAATGGC ATTAAAGCAG GTTGCAAATG CAGGTACCGA GGTTGAAGTT GTCTCGCTTC AATCAGAAGC CAAGATGGAT AACTTGGAGT ACCGTTTTTA TGAATCGCTC GTAATAGGGG ATGTGGTAAA AGTTGCTAAG GAGGGAGATG TGAATGGCGT CGATGCCATG GTGATTGGTT GTTTTTACGA TCTGGCTTTG GAGGATTGTC GCGAGATCTG CCAAAACACT TTGGTCGTCG CTCCCTGTCA GGCGAGTATG CAAGTTGCAG CGAATATTGC CAATAAGTTC TCAGTGATTG TGGGTCAGGT AAAGTGGATT GAGCAGATGA CAGAGAGGGC TGAACGCTAC GGGTATGGGG GATATTTAGC TTCTATGCGC TCAATTGATA TGAGTGCGAA CTCATTGCAG TGTGATACTC AAGTGACAAC TGATCGTATT ATTGAGGCAG GAAGATTGGC GATAGAGGAA GATCATGCAG AGGCGTTAAT TTTAGGCTGT ACCTGTAACT TTGGCCTGTA TGAAAAAGTA CAGCAGGAGT TAGGCGTTCC TGTCATCGAT CCGCTAATCG CAGCGCTAAA ACAGGCTGAG ATGCTGGCAT CAATGAAGCA GGCTTTTCAT TTAGCTCCGA GTAATAAGTG GAGTTGTGAG CCGCCTTCTG AGAGTGAGAT GCTTAAATTT GGGTTGCACA GCCTAACAGA GTCGATAGGA AACCGTTTTT TGATAAGTTA G
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Protein sequence | MNNQSKIRIR WLNPIAQPHY DEPMGMALKQ VANAGTEVEV VSLQSEAKMD NLEYRFYESL VIGDVVKVAK EGDVNGVDAM VIGCFYDLAL EDCREICQNT LVVAPCQASM QVAANIANKF SVIVGQVKWI EQMTERAERY GYGGYLASMR SIDMSANSLQ CDTQVTTDRI IEAGRLAIEE DHAEALILGC TCNFGLYEKV QQELGVPVID PLIAALKQAE MLASMKQAFH LAPSNKWSCE PPSESEMLKF GLHSLTESIG NRFLIS
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