Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4024 |
Symbol | |
ID | 6118374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4895590 |
End bp | 4896438 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635585 |
Product | Ion transport protein |
Protein accession | YP_001762375 |
Protein GI | 170728349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.457934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCAA ATGTTTCTGG ATTACAGAGC AAGCTTAAGT TGATTGATAA CAGTAAGGCC TTTCAGGGCT TTGTTATTTT TGTGATTATC GTTTCTGCGC TTTCAATTGG TGCGCACACC TACCATCTTC CCACATGGAT GGAGCAGAGC TTAGTTGTGT TAGACGTGGG GATCACGGTG TTTTTTGCTA TTGAGATTGT TATCCGTTTT CTGGCCAGTG ATGGACCGAA AAAGTTTTTC AGTAACGGCT GGAACATCTT CGATACCCTG ATTGTTATTG GTAGTTTAAT TCCGGCTGGT GGCGCAGGTA TTTTGATTGC ACGACTGCTG CGTATCTTTA GGGTGCTGCG TTTGGTGTCG ATGATCCCCG AGCTGCGAAT GTTGGTCAAT GCACTGCTTA AAGCGATCCC TCGTATGGGT TATATCGCCC TACTGATGTT TGTGATTTTC TACATTTACG GCGCGATAGG TAGCATGTTG TTCGCTCATA TCAATGATTT TCTCTGGGGC GATGTGTCGG TGGCCATGTT AACCCTGTTT AGGGTATCAA CCTTTGAATC GTGGACCTCG GTTATGTATG AGACTATGGC GGTGTATCCC CTAAGTTGGC TCTATTACTT AAGTTTTATC TTCCTGACTG CATTCGTGTT TTTAAATATG ATGGTGGGTG CAGTGCTGGA TGTGATGACC CAAGAAACTC AGGCTATGCG GGAAGAGGAG GCCGATGAGC TGGCTTTAGA GTCAGGCAAG AGTGCTGAGG TAGACAAACC TGCCAGTGCG GCCGATGTGG CTGAGCTTAA AGCCCAGATA GCCGAGCTCA AAGGGATGTT GATACAAAAG GCGGGGTAG
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Protein sequence | MLANVSGLQS KLKLIDNSKA FQGFVIFVII VSALSIGAHT YHLPTWMEQS LVVLDVGITV FFAIEIVIRF LASDGPKKFF SNGWNIFDTL IVIGSLIPAG GAGILIARLL RIFRVLRLVS MIPELRMLVN ALLKAIPRMG YIALLMFVIF YIYGAIGSML FAHINDFLWG DVSVAMLTLF RVSTFESWTS VMYETMAVYP LSWLYYLSFI FLTAFVFLNM MVGAVLDVMT QETQAMREEE ADELALESGK SAEVDKPASA ADVAELKAQI AELKGMLIQK AG
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