Gene Swoo_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4021 
Symbol 
ID6118371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4890923 
End bp4892398 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content35% 
IMG OID641635582 
Producthypothetical protein 
Protein accessionYP_001762372 
Protein GI170728346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACT TCCACTCTAA CTCCAGTAAA CTATGCTCTC GTTTAAAAAT CAACAATGCA 
TCTATTGGCA GCTGCGTTGT TTTAAAAACT CCCAAAAGAG TAGTGGCAAT TAGCTGCGCA
CATGTTATAT ACGGAGAAGA GCATGAGACA ACCATTGTTG ATGCAAATCA AATTACAGTT
GAAATAGATG GGACAGCGCA TATTTGTTCA AAAATCTTAT CTCCTTTAGC AGATTCAAAA
GCAACCGACA TGGTTGTTAT TGAGCTAGCC GATACCACTC TTCTCTCCAC TTCAAGTTTA
TGTGAATTGA AGGTTTGTTT AGACGTAAAC GAATCTATAT TAGGCTACAA GCAAGCAATG
GTGTTACTGC CAATCCAAGA TAGCTGCCAT TCAGTTGTAT CATTGACTAA ATTTAATAAA
GAAGTCGATG AGCACTCATT CCAAGTAGAA GTTCATAAGC AAACCTTTGT AGATTATGAC
AAAGGCGCAG CTGGCGCAGC TGCCTTTAAA GGTATTTCTG GTTCTGGTCT ATTTGTAGAC
ATGAATGATT CTATATATTT AGCAGGAATA CTATCTAAAC TTCCAAAGTC ATCTGTTGCA
TCAACTGTAG TATTCCAATC ACTAAAGCCA TTAACATCCA TACTACCAGA GCTTAAAGAA
TCAATATCGT TAAAAAAGGG AACTTCTAGC ACACCTGGTG ACATCAATGA CGTATGCTTT
GTTAACTATA CAGGTAGATC GCAGAAATAT TACCAAGAAA GAGCTTGCGA CAGAGACTTT
TGCTCAAATA TCAAACACAA CAGAAATATT TGGTTAAGTG GAGACTCTGG CACGGGAAAA
ACAGCAATAC TACTTCGTAA TTTAATTGAT AACAAAGTGA ACTATATATA TTGCGACCTA
CAACCAGTTG AAATTTCATC CCCACTGGAT ATTTGGCAAG GGGTAATTGA AGACGTAGAA
TCCCATACAG AAAAGAAATT CGAAAATAAA GAGTTCACAG TTAAATTCAT GACCAAATAC
CTTTTGTCAT GTAATTTCAA AAGTGACACA ATATTGGTTA TTGATGAGAT GAGTTGCTCC
AAGAAGGATA TTATTGAAGA CTTTTGTAAA GATGCGATAG CATTAGTGAG CTACTATATA
AAACAAAGTA AAACTAAAAA TCTAACGTTT GTTATATCAA GCATATTCTC ACCTAGCAAA
ACTGAATTTA ATTACGGTAA GTTTCTTGAG TCATTTGATA ATTTATCGTC AAACGAATGG
ACTGATAGCA TATCAAACTT ATTTGACATT CAAAACTCGT CTCTTGGTAA TCGCATAACT
CCAGAAGGTA AAGAACTAAT TTTAAGTCAT TGTGGCTCAT TACCTAGATT GTTGACGCTT
ATTATAAGTA GAATATATAG AGCGAATGAC TTTGAAATAT CTTCCATACA TCAAGCATGT
AAGAAATTAA CTAAAGAGTA CTATGAATAT GTCTAA
 
Protein sequence
MNNFHSNSSK LCSRLKINNA SIGSCVVLKT PKRVVAISCA HVIYGEEHET TIVDANQITV 
EIDGTAHICS KILSPLADSK ATDMVVIELA DTTLLSTSSL CELKVCLDVN ESILGYKQAM
VLLPIQDSCH SVVSLTKFNK EVDEHSFQVE VHKQTFVDYD KGAAGAAAFK GISGSGLFVD
MNDSIYLAGI LSKLPKSSVA STVVFQSLKP LTSILPELKE SISLKKGTSS TPGDINDVCF
VNYTGRSQKY YQERACDRDF CSNIKHNRNI WLSGDSGTGK TAILLRNLID NKVNYIYCDL
QPVEISSPLD IWQGVIEDVE SHTEKKFENK EFTVKFMTKY LLSCNFKSDT ILVIDEMSCS
KKDIIEDFCK DAIALVSYYI KQSKTKNLTF VISSIFSPSK TEFNYGKFLE SFDNLSSNEW
TDSISNLFDI QNSSLGNRIT PEGKELILSH CGSLPRLLTL IISRIYRAND FEISSIHQAC
KKLTKEYYEY V