| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4009 |
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| Symbol | |
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| ID | 6118359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4878633 |
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| End bp | 4879649 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641635570 |
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| Product | transport system permease protein |
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| Protein accession | YP_001762360 |
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| Protein GI | 170728334 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATC GCGCCTGGCT TTGGCCTAGT ATCCTTACTT TTTTAGTGAT CACTTGCCTA
CTATCGATTG TGACTGGACC ACTACAGATA GCTCCCTTGA CCAGTTTCAG TGCGGTGCTG
AACTGGGCAA CACATTTAGA GCTTGGCGCT GTCGCTCCCC ACGAACAGCT CGTCATTAAT
AACGTTCGCC TTCCTAGGAC ACTGCTGGCC ATGACTGTCG GTGCAACGCT AGCTCAATGT
GGCGCCGTGA TGCAGGGGCT ATTTCGCAAC CCTTTGGCAG ATCCCGGGAT CATAGGCGTT
TCATCCGGCG CTGCTCTTGG CGCTGCTATT TGTATCGTGC TTTTCCCTGG AAGTGGTGAG
TACTCAGTCG CCTTCGGGGC ATTTATTGCA GGCCTAATTA CGACACTGGT GGTTTATCGT
TTAGCCAGTA GTTCATCGGG AACCTCTGTC GTCCTGTTGC TACTTTCCGG TGTCGCTATT
GCAGCCTTAG CAGGGGCTGG TATCGGTTTA CTAACCTACT TGGCTGATGA CATGGCACTT
AGGGATTTAA CACTGTGGCA GATGGGTTCT ATTGCTGGGG CGCAGTGGCA ATATGTCACC
TTAAGCCTGC TGGCACTCCT GCTGATTAGT TGGCAGTTCT ATCGCTCCTC TAAAGCATTA
AACGCCCTAC TGTTAGGTGA AGCAGAAGCA CGCCATTTAG GGGTCGAGGT AGATCAATTA
AAGTTTAAGC TTATTTTTCT GTGCGCTGTT GGCGTTGGGA TCTCCGTTGC CGCCACAGGG
ATTATCGGCT TTATCGGGCT GGTGGTGCCC CATATAGTCC GCATGATTAT CGGCCCAGAT
CATAAGCGTC TACTCCCCAT TAGCGCCGTA CTCGGTGCCA TTATCTTAGC TTTAGCCGAT
GTAGGAGCCC GCTCATTGGT CGCTCCCTCA GAGCTGCCAG TAGGGTTAGT TACCGCTATG
CTAGGTGCGC CATTCTTTAT TTTTATGCTG CTAAAGCAGA AAAACAGGCT GATTTAG
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| Protein sequence | MENRAWLWPS ILTFLVITCL LSIVTGPLQI APLTSFSAVL NWATHLELGA VAPHEQLVIN
NVRLPRTLLA MTVGATLAQC GAVMQGLFRN PLADPGIIGV SSGAALGAAI CIVLFPGSGE
YSVAFGAFIA GLITTLVVYR LASSSSGTSV VLLLLSGVAI AALAGAGIGL LTYLADDMAL
RDLTLWQMGS IAGAQWQYVT LSLLALLLIS WQFYRSSKAL NALLLGEAEA RHLGVEVDQL
KFKLIFLCAV GVGISVAATG IIGFIGLVVP HIVRMIIGPD HKRLLPISAV LGAIILALAD
VGARSLVAPS ELPVGLVTAM LGAPFFIFML LKQKNRLI
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