| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4008 |
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| Symbol | |
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| ID | 6118358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4877677 |
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| End bp | 4878591 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635569 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001762359 |
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| Protein GI | 170728333 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.756364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAACA AGACGAAATT AAATGGCTTT ATTCCGCCGA AAATAGTCGC CACAACCTTG
CTTTGGGCTG GGCTGTCAGC TGGCGTTTCG GCACATGATG CAGAGCATCA TAATGAAGTC
ACTCGCCTTA TCAGTGCGGG AGCAGGTATG ACAGAGCTGG TCATTGCACT CGATGCTGGC
GATGAGCTCG TTGCAGTCGA CTCCACCAGT CAACTTCCTG AAACCTTTAG CTCGGTAGAG
AAATTGGGTT ATCACAGAAT GCTATCAGCT GAAGGGATTT TAGCCTTAGA GCCAGACTTG
GTCTTGGGAA GCGATGCCAT GGGGCCGGAA ACCACCTTAG AGGTACTAGA AGGCGCCGAT
ATTAAAGTCG TAAAACTTGC AGGGGCGGAA ACTGCAGAGC AACTGCTAAG TAATATTAAT
AGGCTAGGTG AACTGCTAGA CAGGCAGAAG CAGGCTGAGA CACTTAAATT TCGTGTTGCC
CAATCCTTCG ATTCAATTAA GCAAAAAAGA GTGAGTATTA CAGGTTCTGA CAAGGTTCCC
TCTATCCTGT TTATGTTGCT GCAAGATGAC AGGCCCGTTC GTGTTGGCGG TGAAGGAACA
GCTGCCGATA CCATCATTAA GCTCGCAGGC GGAAAAAATA TCGCAGACTT TGTTGGCTAC
AAAAGTCTCT CTCAAGAGGG AGTACTAGCG CTTCAGCCGG ATCTTATCTT AATTTCAAGC
CGCTCAGAGA GTGAGGAGCA GAGCGCGCCA GATAAAGTCT TAAAGCAGAT GCCGCTGCTT
ATCCACACTC CCGCGGGTGA ACATAAGATG ATCCACAGCT TAAAGGCACA GGCACTGCTC
GGAGGATTAG GTCTAAGCTC GCTCGAAGCC GCTGATAAGT TAGCAAGCAG TCTTATTGAG
ATACAGAAGT ATTAG
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| Protein sequence | MLNKTKLNGF IPPKIVATTL LWAGLSAGVS AHDAEHHNEV TRLISAGAGM TELVIALDAG
DELVAVDSTS QLPETFSSVE KLGYHRMLSA EGILALEPDL VLGSDAMGPE TTLEVLEGAD
IKVVKLAGAE TAEQLLSNIN RLGELLDRQK QAETLKFRVA QSFDSIKQKR VSITGSDKVP
SILFMLLQDD RPVRVGGEGT AADTIIKLAG GKNIADFVGY KSLSQEGVLA LQPDLILISS
RSESEEQSAP DKVLKQMPLL IHTPAGEHKM IHSLKAQALL GGLGLSSLEA ADKLASSLIE
IQKY
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