| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4007 |
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| Symbol | |
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| ID | 6118357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4877221 |
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| End bp | 4877634 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635568 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001762358 |
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| Protein GI | 170728332 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.756364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGAAG TTAAACATGA AGGAAATAAC ACGATTTCTG GACTAGATCT CACGCCTCTA
ATCGACATCA TCTTTATCGT TTTAGTCTTC TTGCTGCTCA CCGCTAACAC TCAGCTACTT
AGCCTACCAG TGGATGTTCC CACAGAGTCC AGTGCTGAAC TAACCCCGAT AGATCAAGTT
GAAAATATCA CGATTAATGT TCTTGCTACA AAGCCTCACT GGGCACTCGA CGGAATACCC
TTTGAGCAGT TTACAGAGTT TGAACACGCC TTTATCAAGC AGTATCAGCA ACAGAGCGAG
GCCAAGGTGA TTATTGCCGC TGACAAAACT GCGCCAGTCC AACCTTTAAT GGCTTTACTT
TCACTGCTGC AGAGGCAGCA GATAACCAAT ACTCAAATTT TGATGGAACA GTAA
|
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| Protein sequence | MIEVKHEGNN TISGLDLTPL IDIIFIVLVF LLLTANTQLL SLPVDVPTES SAELTPIDQV
ENITINVLAT KPHWALDGIP FEQFTEFEHA FIKQYQQQSE AKVIIAADKT APVQPLMALL
SLLQRQQITN TQILMEQ
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