| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4005 |
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| Symbol | |
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| ID | 6118355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4875705 |
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| End bp | 4876451 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635566 |
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| Product | TonB family protein |
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| Protein accession | YP_001762356 |
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| Protein GI | 170728330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTA AACGATATTT TACCTTTGCC TGTTTAACTG CCCTCATTCA GGGTGGGGTC
ATAGCATCTC AAGGAAAACC ACCACAGCTC CCAGCTGGGG TAGCGATGGG TTCACTCCAA
AGTGTGAGCA TCGCACTCTC TACACCTGCC GCTCAGGCAT CACAAACTGT AGATAGTAAG
CCTGTAGAGA AAAAGGTGGA TCAAACAGCC GAGATAAGCA CAACACCTGA GCCAAAGAGT
AAACCCAGCA CTCCGAAAAC AGTGGTGCAT CAAGTCGCTA AACATAAAAA GCAGGTTGAA
CAAAAGAGGA TAGATAACAA TTCAGCCTCA CAGACTAAAC CGAAAAGTAA AATAACTGAG
CTTAATCAAC AAGCTGACAC AGAGACATTA ATCGCTGATA CAGAGCCCAA AGCAGACTTA
GCCTCCAAAC AAGTCGAGGC CCAGGCGAAA CAGGGAGTAT CACAAGCCAG TATCGCCCTG
AGCCGCCCCA CTTTTTCGGT GCCTCCATCA CGGCCCAGTT ACCCTAAACT GGCCAGAAAA
CGAGGATTTG AAGGAACTGC AACTATCGAA GTGATGTTTA ATCAGATAGG AGAGCAACTC
TCCCTCACCT TGATCAACAG TTCAGGCTTT AACCTACTGG ATAGGGCTGC TTTGAGCGCA
GTAAAGAGCT GGCAATTCGC GGCTCCATCA CCACAAACAG CCTACGCCTA TACCGTGAGA
GTGCCGGTTA AATTTGCCCT TAACTAA
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| Protein sequence | MTPKRYFTFA CLTALIQGGV IASQGKPPQL PAGVAMGSLQ SVSIALSTPA AQASQTVDSK
PVEKKVDQTA EISTTPEPKS KPSTPKTVVH QVAKHKKQVE QKRIDNNSAS QTKPKSKITE
LNQQADTETL IADTEPKADL ASKQVEAQAK QGVSQASIAL SRPTFSVPPS RPSYPKLARK
RGFEGTATIE VMFNQIGEQL SLTLINSSGF NLLDRAALSA VKSWQFAAPS PQTAYAYTVR
VPVKFALN
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