| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3997 |
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| Symbol | |
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| ID | 6118347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4866769 |
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| End bp | 4867554 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635559 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001762349 |
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| Protein GI | 170728323 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.106241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.415557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA TGATTGAACT TACCCCATCG AATGAGTCTA TGAAGCCTCT TTCTAGACCT
ATCGTGGTTG TAAATCGAGA GTTGTTTATT CATTCAACCG TTAAGAAACA TCGCCATACT
TGGGGTCAGT TTGTTTATGC AAGTCGTGGA GTGCTAGCTG TTGCGACTAC AGTAAGTCGT
TATATAGTGC CACCTGAGCA AGGGGTTTGG GTGACCCCCA ATACCTGCCA TGAAGTGACG
GCAATAAGTG ATGTGGAGTT GACGAGTTTC TATTTTGACA ATACTGTTCT TAGCGGGTTT
CCTGAGTGTT GTTGTGTACT CAATGTGGAG TTTTTTTTGA AGGTATTGAT TGTAGAATCT
AAGAGCATTG ATGGAGACTA TGAATGGTCT GGTGTCGATG GCCGACTACT CAGACTTATT
CGAGATAAGC TAATTGTCGC GATAAAAATA CCCTTACAAC TTCCTTATCC AAAGGATTCT
AGGCTGCTTG CGATACTAAC TCAGTTACAG CTCGAACCGT CAAATCGTAA TAACTTAGTA
CAATGGGGGA ACATTGTTGG TGCTTCGGCT CGCACGTTAT CACGGCTATT TAAAAATGAA
ACGGGCTTAA CTTATAGTGA ATGGAGGCAA AGATTTAATG TTCAAGTAGC AATCACCAAA
TTATCTTCTG GAGAAACGGT TAGCAATATA TCACTTAATC TTGGTTATGA GTCTCCTTCA
TCTTTTATCT ACATGTTCCG AAAACTTACC GGAGTAACAC CAGGGTTTTA TAGTCAGCTA
GGTTAA
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| Protein sequence | MPKMIELTPS NESMKPLSRP IVVVNRELFI HSTVKKHRHT WGQFVYASRG VLAVATTVSR
YIVPPEQGVW VTPNTCHEVT AISDVELTSF YFDNTVLSGF PECCCVLNVE FFLKVLIVES
KSIDGDYEWS GVDGRLLRLI RDKLIVAIKI PLQLPYPKDS RLLAILTQLQ LEPSNRNNLV
QWGNIVGASA RTLSRLFKNE TGLTYSEWRQ RFNVQVAITK LSSGETVSNI SLNLGYESPS
SFIYMFRKLT GVTPGFYSQL G
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