Gene Swoo_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3990 
Symbol 
ID6118340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4856688 
End bp4857017 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID641635552 
Producthypothetical protein 
Protein accessionYP_001762342 
Protein GI170728316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.364321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG CAGGTAAAGA GACCACCATT TTTCAGTTAG CTGATCAATT TATTGCCCTA 
GCCAATGAGC TAAGCGCTAA AGAGCAAGAT GTTAGTAAAG TCGGTACCGC ATTACGCTTT
GCCGCTTCGC GCTTTAACGC CTTTGAAGCC GCACTTAAGT CTGCCGATCT AGCTGCAGAG
AAAGAGAATG CCCTTGAATG GTTCGTTAAT GAGTACAAAG CGATGCTCAA CGACAACTTA
GACGACCATA TCAAGCACCC ACCAGTCTCT CACTCTGAGC CCGCTGAAGA ACCAGCTCAA
GATGACGCAG TGCAGGTTTT CAAAAGCTAA
 
Protein sequence
MSEAGKETTI FQLADQFIAL ANELSAKEQD VSKVGTALRF AASRFNAFEA ALKSADLAAE 
KENALEWFVN EYKAMLNDNL DDHIKHPPVS HSEPAEEPAQ DDAVQVFKS