| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3982 |
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| Symbol | |
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| ID | 6118332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4851186 |
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| End bp | 4851704 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635544 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001762334 |
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| Protein GI | 170728308 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.796853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAG CGCGAACGGC GATGGGAGAT AGAGAAGCGT TTAAGTCTTT ATACCTGAGT
CTTTCGCCTA AGATTTTTCC TGTATTAATG CAGCTTATGC ATGATCGACA GCTAGCAGAA
GATCTGCTTC AAGACACTTT TGTGCGGATC TGGGAGCAAG CTTCTCGCTA TGATCTGAAT
AAAAGTGGAG CTTATACCTG GAGCTACACT ATTGCCCGTC ATCTAGCGCT GGATCATCTG
AGGCGCAGCT CGAAACGTCG AACTGAGCAT CATACCGAGC GGGAGATAGA ACTTGATGTG
ACGGAGAGCA ACATGTTTTC GTCAAGTAGC CACACCCAAG GCAGAGTCGA TAACTGTTTA
TCACAACTTA AAGGTGATCA GCGCCAAGCA GTGATCTTGA GTTACTGTTA TGGTTATGAA
CAGCGAGAAC TTGTGGGGGT TTTGTCACAC CCACTAGGAA CCATCAAGTC TTGGTTAAGG
CGCGGAATGG AGTTCATGCA ACAATGCGTA TCCCATTAA
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| Protein sequence | MLLARTAMGD REAFKSLYLS LSPKIFPVLM QLMHDRQLAE DLLQDTFVRI WEQASRYDLN
KSGAYTWSYT IARHLALDHL RRSSKRRTEH HTEREIELDV TESNMFSSSS HTQGRVDNCL
SQLKGDQRQA VILSYCYGYE QRELVGVLSH PLGTIKSWLR RGMEFMQQCV SH
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