| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3981 |
|---|
| Symbol | |
|---|
| ID | 6118331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4850488 |
|---|
| End bp | 4851201 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641635543 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762333 |
|---|
| Protein GI | 170728307 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.822328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCC CATTAAGGTA TTACGACCCA GCTTTGCAGA AACAGCTTAT TCATAGTTAT
GTTAGCGGTT TGATGAGCTA TCGGGCTCGA TTGCGGATGA GAGGATTACT GCAACAGCTG
CCTGAACTCG AGGCGCAACT GTTAATTGCT GAGGCCGATT TTAAGCTGCT CAATGCAAAT
CTGGCGCAAG ATGCACCTAG TGCTAAGAGT TGGAAACAGA TCCAATTACG CCTTGGCTGG
CAAGTAGAGC GTTGGTGGCA AAAAATTAAC TATTGGAGAG CCACTTCTGC CGCATTAGCA
CTCTCTTTGC TTGTGACAAT CACAGCGCAG GTTTATCTTC CTGACCAAGA TACTTTGTCA
GAATATGTAC CCATCAGTTA TGTCGGTATT CTAAATGCTG ATGACACTGA GGCAAGTCTA
GCGGCGGCTG TTCATCGCGC CACAGATGCA GAAGATGCTC CTTGGATGAT GACCTTGCAC
CTGACTCAGC CATGGTCTGA ATCAGCCGAG CCTGCTAGTT TATGGATCAC CGATAGCCGT
GGCCGTAAAC GCTCAATGGG GCCAGTTCAA AGCCAAGATA CCCAGCAGTT TCAGCTGACA
GACTCCCAAT GGCAATTTAT TCAAGGTGCG GTGTGGATGG AGCTGATCGC TGATAATAAT
GGCAGAGTGA TTTTGCAGGG CAAGTGCCTC TCATTAAAAC AGTGGCAGAG TTAA
|
|---|
| Protein sequence | MRIPLRYYDP ALQKQLIHSY VSGLMSYRAR LRMRGLLQQL PELEAQLLIA EADFKLLNAN
LAQDAPSAKS WKQIQLRLGW QVERWWQKIN YWRATSAALA LSLLVTITAQ VYLPDQDTLS
EYVPISYVGI LNADDTEASL AAAVHRATDA EDAPWMMTLH LTQPWSESAE PASLWITDSR
GRKRSMGPVQ SQDTQQFQLT DSQWQFIQGA VWMELIADNN GRVILQGKCL SLKQWQS
|
|---|
| |