Gene Swoo_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3979 
Symbol 
ID6118329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4849011 
End bp4849400 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content45% 
IMG OID641635541 
Producthypothetical protein 
Protein accessionYP_001762331 
Protein GI170728305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.76505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGT TAAGCCTCTG GTTGCTATTA CTCTGTTTAA TCACTCCCTT GCCCGCTTTG 
AGTCAAGATA GCTCAATCGT GTTTACTGCA ACCCCTGAGC GATGTGTTGC GTTGCATAAG
GGACAGACCT GCTATCAGGA TGTACTGTTT CAGTGGCAGA CACCGCAAGT AGGCAGTTAC
TGTTTAGTCA TGTCGCAAAG CCTGCATCAG TTAGCCTGTT GGAATGGTCA AGCAGTACAG
AAGTATCAAT ATAGTTTCGA AGGCGACAGT ACCACAACCT TTAGTTTAAT CCGAAATGAT
GAAGCCGAGC CTTTAGCGGA GGTTAAGGTG GTGGTGACTT GGGTGTATAA AGCACCTAAA
CAGAGTCAGT CTGGCTGGAG ATTATTTTAG
 
Protein sequence
MDKLSLWLLL LCLITPLPAL SQDSSIVFTA TPERCVALHK GQTCYQDVLF QWQTPQVGSY 
CLVMSQSLHQ LACWNGQAVQ KYQYSFEGDS TTTFSLIRND EAEPLAEVKV VVTWVYKAPK
QSQSGWRLF