Gene Swoo_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3973 
Symbol 
ID6118322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4843674 
End bp4844240 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content50% 
IMG OID641635534 
ProductyecA family protein 
Protein accessionYP_001762325 
Protein GI170728299 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC CCCCATCTTT ACGTATCGAC AACCTAAAAG CTGCACTTAA TGCGGCCGAT 
ATTGCCCAAC ATCCCGTTGA GGTACATGGT GCCCTCGTTG GCCTTATTTG TGGTGGCATA
GAGCAGTCCA GAAGAGAGTG GAGTGCCTCA CTGCTTGAGT TGATGAATGA TGGACAAGCC
TTGCCTGAGT CTTTGCAGCA TCTTATCGAT GAACTCTATC AAGACACCTT AGCTAGGATC
TCTGATGTAG ACTTTGGATT CTCACCTATG TTGCCAGAGG AGGAGGAGCC TGTCTCGGTT
CGCGTTGAAG CACTATCGCT TTGGGTGCAG AGCTTCTTGA CTGGCCTAGC CATAGTTCAG
CCTAAACTGC ACAATGCATC GGCGGATGTG CGTGAAGTGA TTAAAGATTT AGCCGAAATT
GCACTGGTCG AGTTCGATGT TGCCGACGAT GATGAGTCTG AAGCGGCCTA TATGGAGCTC
ACCGAGTTTG CCAAAATGGC TGCGCTGCTT TGCTACTCTG AGTTTGGCCC AGAGCCATCG
GAGTCACAAG CAGGTGTTAT CCACTAA
 
Protein sequence
MATPPSLRID NLKAALNAAD IAQHPVEVHG ALVGLICGGI EQSRREWSAS LLELMNDGQA 
LPESLQHLID ELYQDTLARI SDVDFGFSPM LPEEEEPVSV RVEALSLWVQ SFLTGLAIVQ
PKLHNASADV REVIKDLAEI ALVEFDVADD DESEAAYMEL TEFAKMAALL CYSEFGPEPS
ESQAGVIH