| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3969 |
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| Symbol | gcvT |
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| ID | 6118318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4839069 |
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| End bp | 4840163 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635530 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001762321 |
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| Protein GI | 170728295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.431724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATA AAACAGTACT CTTTAACAAG CACCTTGAAT CAGACGCTAA GATGGTAGAT
TTCCACGGTT GGGATATGCC ACTGAACTAT GGTTCACAAA TCGAAGAGCA TCACGCGGTT
CGTCAAGACG CTGGTATGTT CGATGTGTCA CACATGACGG TCGTTGACGT CAATGGCACC
GATGCCTGTG CTTTCCTACG TAAATTATTA GCGAACGATG TGGCTAAACT TAAGGTGCCG
GGTAAGGCGC TTTATGGCGG CATGTTAGAT CATAATGCCG GCGTTATCGA CGACCTAATC
ACCTACTACC TCAACGACAC TCACTACCGC ATCGTGGTTA ACTCTGCGAC TCGCGAAAAA
GATTTAGCCT GGATTGCACA AGAGGTCAAA GGCTTCGATG TTGTTATCAC AGAGCGTCCA
GAGCTTGCGA TGATCGCCGT TCAAGGACCT AATGCTAAAG CTAAAGCCGC TAGCGTATTT
AACACTGCAC AAAATGCTGC CGTTGAAGGG ATGAAGCCAT TTTTCGGTGT ACAAGCTGAC
TCACTCTTTA TTGCTACCAC AGGTTACACA GGTGAAACCG GTTACGAGAT CATCGTGCCA
GATTCAGAAG CCGAAGCACT ATGGCTGGCA TTGCTAGAAG CTGGCGTTAA GCCATGTGGA
CTCGGCGCAC GTGATACACT GCGTTTAGAA GCGGGCATGA ACCTTTACGG CCTCGACATG
GACGAAAGCG TTAACCCACT TGCAGCTAAC ATGGGTTGGA CTATCGCATG GGAACCAGCA
GATCGTAACT TCAACGGTCG TGAAGCACTA GCAGCCATCA AGGCCGCAGG CACCGAGAAG
ATGGTTGGTT TAATCATGGA GGCCAAAGGC GTAATTCGTC CAGGTATGAG CGTCTTCTTC
AGCGACAGTG ATGGTGTCGA GCAACAGGGC ACAATTACCA GTGGTACCTT CTCGCCAACT
CTAGGTTACT CTATCGCCAT GGCGCGCGTA CCTAGAAGTA TCGCAGATAC GGCTGAAGTC
GAAATGCGTA AGAAGCGTGT TCCTGTTAAA GTGATTGCAC CATCGTTTGT GCGCAACGGT
AAACAAGCAT TCTAA
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| Protein sequence | MANKTVLFNK HLESDAKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVNGT
DACAFLRKLL ANDVAKLKVP GKALYGGMLD HNAGVIDDLI TYYLNDTHYR IVVNSATREK
DLAWIAQEVK GFDVVITERP ELAMIAVQGP NAKAKAASVF NTAQNAAVEG MKPFFGVQAD
SLFIATTGYT GETGYEIIVP DSEAEALWLA LLEAGVKPCG LGARDTLRLE AGMNLYGLDM
DESVNPLAAN MGWTIAWEPA DRNFNGREAL AAIKAAGTEK MVGLIMEAKG VIRPGMSVFF
SDSDGVEQQG TITSGTFSPT LGYSIAMARV PRSIADTAEV EMRKKRVPVK VIAPSFVRNG
KQAF
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