Gene Swoo_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3949 
Symbol 
ID6118298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4815293 
End bp4815589 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content48% 
IMG OID641635510 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_001762301 
Protein GI170728275 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCTG CCGCCACAAT TGCAATTCTC GTCGTTATGT TGCTAGCTAT TGCTCGCTGC 
ATCATCGGCC CGACTCTGTA CGATCGCATA TTAGCCTTCA ACATGTTTGG TACCAAAACG
GTACTGCTGA TCTCAGTATT AGGCTTTTTA ATGGGACGAC CAGAGTTCCT CGACATCGCG
CTCGTCTATG CCCTGATTAA TTTTATCAGT GTCGTAGGCG TATTGCGCTT TTCTGACTCC
GCCGAGTTCA AGGTTACCCC CTATGAACGC CAATCAACCA AGGAGGGTGA GGAATGA
 
Protein sequence
MLAAATIAIL VVMLLAIARC IIGPTLYDRI LAFNMFGTKT VLLISVLGFL MGRPEFLDIA 
LVYALINFIS VVGVLRFSDS AEFKVTPYER QSTKEGEE