| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3941 |
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| Symbol | |
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| ID | 6118290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4805214 |
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| End bp | 4807649 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635502 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_001762293 |
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| Protein GI | 170728267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAAC AACTGGTAAT TTTTCTAAAT AGTGTCCTCT TGGTGTCAGT TTGCATAAAT
GCAAATGCCA AACCTATTAA TATTATGCCG CTTCCAGCCG AGCTAAAAAT AGCTCCCGAC
TCAACTCATT TTCATATCTC TCCAGCGCTA TCATTTGCCA CCTCTGGTAT CCCTGATAAC
AATGCGCTGC AATTTAAACA AACCATGCAA GAGCTCTTAG CAGCCAGAAT CCAAACGAAT
TTAACACTCA ACTCCATCAA TGACGATGTC AAAAGTAGTG ATAAGCCAGA TGTTCTAGTT
AAACTGACGC AGCAACCACT AAACCGTCCA CCTCAACTCG GTGATGATGA AAGTTATGAG
CTAGATATCA GCTCAACACA GCTCACCCTT ATTGCTAGCA ATGAGCTAGG TATCAAACAT
GGGCTTAACA CTCTCAGCCA GCTACTACTA ACGACACCGC AGGGGATAGG TAAAGCAGAT
ATCCCTGCGA TCGTGATAAA AGATAAACCT CGTTATCCTT GGCGCGGCTT GCTGATTGAT
AGTGTGCGTC ACTTTATGCC AATTGAAACC ATTAAGCGTC AACTCGACGG TATGGCTTCG
GCAAAGCTCA ATGTTTTTCA TTGGCACCTA ACTGACGATC AAGGCTGGAG GATCGAATCA
AAAATCTACC CAGCACTGCA TCAAAAGGCA TCTGATGGAA AGTTCTATAC TCAAGCTGAG
ATAACCTCGA TTGTTGAGTA CGCCTCTCAC AAAGGGATCC GTGTAGTGCC AGAGTTAGAT
CTACCAGGGC ATGCTTCAGC AATCGCGGTG GCCTATCCAG AGTTAATGAG CGCAGAAGGC
CCCTATGAAA TGGAGCGGCA ATGGGGGGTA TTTGAGCCTA TTCTCGATCC TACAAACCCC
GAGGTTTATC AGTTTATCGA TAAACTAGTC GGTGAGTTGA CCACTCTTTT TCCCGATCAT
TACTTGCATA TAGGCGGCGA TGAGGTCCCA CCGACTCAGT GGCTCAATAA TGAAAGTATC
ACAGAGTATA TGCAAAAGAA TGCGTTGCTT AATGCAGAAG ATCTTCAGGC ACACTTTAAT
CAAAAAGTGA ATAAGATCTT GGCTCAACAC AAACGATTTA TGATGGGCTG GGATGAGATA
TTTCATCCTA AATTACCTTC AGATATATTG GTACAGTCAT GGCGTGGGCT CGACTCACTT
TCGCAAATTA CCGCCGCTGG ATATCAAGGC TTGCTCTCAA CAGGCTTTTA TATCGATCAG
GCACAATATA CTGACTATCA CTATCGCAAT GACCCACAAA GTGAGCCCGC CCCCTTAGTA
GCCTTATTGC CCGCAGATGT TCAGGGCGAG GTATGGCAAT TTACTATGCC AAGGTATAAA
GGCTCTCCTA TTCATGGTGA GTTATTGATT GTTCACGATA GCCAACCCTA TGCTTACCTG
AGCCTCAACG GGAAATTATC CAAAAAAGTC AATAAACTCA TACTCTCAGA GAATAAGATT
GAGTACCGTA TAGATACCTG GATGGGGCCA ACCACAGCGG AGTTCACCAT ATCGAACGAC
ACTGTTTTAG CCGGGCACAT ATTTGTCGGC AACACGCTTT ACCCAATCAC AGGACAACGC
TCAGCGCTAG CTCAGGCAAG TCAGTTAACT AAAGCAAAAT TAAAACAAGC TCCTGTAGAG
CTCATTGCTG ATCATAATAA GGTTTTAGGT GGTGAGGCGA CGATATGGTC TGAGCTTATC
ACCCATGAAA ATATCGACAT CAGAGTCTGG CCACGACTAT ATGCTATCGC TGAGCGTTTG
TGGTCGCCAA AAGAGCTCAC CGATAGTCAA AATATGTATC AACGTTTAGC TTCAATAAGC
AGCTATAGCC AGCGCTATAT CGGCCTTGAA CATAAACAGC AGCAACAGCA AGGGCTACAA
AACTTAGTCG CTCAAAATAG CGACATATCG CCTTTACAAC TGCTGGCTGA AACGGTGGAA
CCTGCACACT ACTACACTCG CCACCACCTC AAATTTCAAG CCAATGAGTA TCATCAGCAA
GCGCCACTGA ATCGATTTGT GGACTACCTT GATGTTGAGA GCCTGCCATT GATTTTTTTA
CATCAAGGGT TAGCGAAGGC AAAAGATAAG GAGAGTCTAG AGTTCGCCAA TGCTCTAAAT
CTGATTGAGA CAGCACTGCT AAAGTGGCAA AAAAATCAAC CAAGGTTAAA GCAACTCATT
GACCAATCGC CCAAGTTACA CAGTATCAAG CAGGTAGCAG AGCTAAATGA TAAAACCCTC
AACTTAGGCA TCGAACTAGT TAAACTATGC CGCAACAACA GCTTAACTGA ACTTAGTGCC
CTAGATGATG AGTTAATCTC AATCTTGTCT TATAAAGGAG AGGTTGTCCT AGCATCGGCT
CACTTGCTAC GCGAACTGAT AAGGAGATGT CGCTAA
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| Protein sequence | MWQQLVIFLN SVLLVSVCIN ANAKPINIMP LPAELKIAPD STHFHISPAL SFATSGIPDN
NALQFKQTMQ ELLAARIQTN LTLNSINDDV KSSDKPDVLV KLTQQPLNRP PQLGDDESYE
LDISSTQLTL IASNELGIKH GLNTLSQLLL TTPQGIGKAD IPAIVIKDKP RYPWRGLLID
SVRHFMPIET IKRQLDGMAS AKLNVFHWHL TDDQGWRIES KIYPALHQKA SDGKFYTQAE
ITSIVEYASH KGIRVVPELD LPGHASAIAV AYPELMSAEG PYEMERQWGV FEPILDPTNP
EVYQFIDKLV GELTTLFPDH YLHIGGDEVP PTQWLNNESI TEYMQKNALL NAEDLQAHFN
QKVNKILAQH KRFMMGWDEI FHPKLPSDIL VQSWRGLDSL SQITAAGYQG LLSTGFYIDQ
AQYTDYHYRN DPQSEPAPLV ALLPADVQGE VWQFTMPRYK GSPIHGELLI VHDSQPYAYL
SLNGKLSKKV NKLILSENKI EYRIDTWMGP TTAEFTISND TVLAGHIFVG NTLYPITGQR
SALAQASQLT KAKLKQAPVE LIADHNKVLG GEATIWSELI THENIDIRVW PRLYAIAERL
WSPKELTDSQ NMYQRLASIS SYSQRYIGLE HKQQQQQGLQ NLVAQNSDIS PLQLLAETVE
PAHYYTRHHL KFQANEYHQQ APLNRFVDYL DVESLPLIFL HQGLAKAKDK ESLEFANALN
LIETALLKWQ KNQPRLKQLI DQSPKLHSIK QVAELNDKTL NLGIELVKLC RNNSLTELSA
LDDELISILS YKGEVVLASA HLLRELIRRC R
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