| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3940 |
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| Symbol | |
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| ID | 6118289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4804163 |
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| End bp | 4805050 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635501 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001762292 |
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| Protein GI | 170728266 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCG TCAGTTTTCT AAGCTGCATA GCATTGTTGT TATTGAGTCC AATGGGCACA
CTCTTAGCGG ATCAACGTCA TAGTGAAGAC TGGGTTAAAG ATCAGGTTTT TACTTCTGGT
GTTGAGGGGC CAGCAGTAAA TAGCAAGGGG GAGCTATTTG CGGTTAATTT CGCCAAAGAG
GGGACAATAG GCAAGGTGAC GGCTCAGCAC AAAGCTTCAC ACTTTATGAC TTTACCCGAA
GGCTCAGTGG GTAATGGGAT CCGCTTTGAT AAACAAGATA ATATGTATAT AGCCGATTAT
GCGGGCCATA ACATTCTAAG AGTGGACGCT GGCACTGAGG TCGCTTACGT TTTCTCCCAT
CAGCCAAAGA TGAATCAACC TAATGATATT GCAATGATGG ATTCAGGTAT TCTCTTTGCC
AGTGATCCTA ATTGGTCGAA TAGTTCTGGT CAGTTATGGC GTATTGACAC CGATGGAGTG
ACTCAACTGT TAGAGTCTGA CATGGGCACA ACAAATGGTG TTGAAGTGAG CCCAGATAAT
AAAAGGCTCT ATGTGAATGA AAGTGTTCAA CGAAAAGTCT GGGTGTATGA TCTAAATATG
CAAGGTGAGA TCAGCAATAA ACGCTTGTTG ATTGAGTTTG CAGATCATGG CTTGGATGGA
ATGCGCACCG ATATCCACGG CAATTTATAC ATTGCCCGTT ATGGAGCCGG TGTTGTTGCT
GTTGTCTCTG CGAGTGGCGA ACTGCTTGAA GAGATCAGAC TTAAGGGACA GCATCCGACT
AATGTCGCAT TTGGTGGAGA GGATGGACAT AGCTTGTTTA TCACGATGCA AAAACGTGGG
GCTATAGAAC ATGTTCGTGT TAAATATGCC GGTAGAACTT TTATGTGA
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| Protein sequence | MKGVSFLSCI ALLLLSPMGT LLADQRHSED WVKDQVFTSG VEGPAVNSKG ELFAVNFAKE
GTIGKVTAQH KASHFMTLPE GSVGNGIRFD KQDNMYIADY AGHNILRVDA GTEVAYVFSH
QPKMNQPNDI AMMDSGILFA SDPNWSNSSG QLWRIDTDGV TQLLESDMGT TNGVEVSPDN
KRLYVNESVQ RKVWVYDLNM QGEISNKRLL IEFADHGLDG MRTDIHGNLY IARYGAGVVA
VVSASGELLE EIRLKGQHPT NVAFGGEDGH SLFITMQKRG AIEHVRVKYA GRTFM
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