| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3926 |
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| Symbol | |
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| ID | 6118275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4784704 |
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| End bp | 4787478 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635488 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001762279 |
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| Protein GI | 170728253 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AACTGCACAC CATCGCCTTT ACCTTAGATG ATGTTGAGGT CACAGCAAGC
CCCGATGAAA CACTATGGCA AGTCGCCAAA CGCCAGGGAA ATAAGCTACC TCACCTCTGC
TTTACTGACA GTTCAGGTTA TCGACCCGAC GGTAACTGCC GAGCCTGCAT GGTTGAGATA
GAGGGAGAGC GGGTTCTTGC CGCCTCCTGT CTGCGCAAAC CTACTCAAGG CATGGTGGTG
CATAGTCAAA GTTCTCGAGC AACACGCTCT CGAAAAATGG TGATGGAGTT ATTGTTAACC
GATCAACCAA AGCAGATCAG TGACAGTGGC TCCCATCTTT CCCAAATGGC ACAGTTACAA
GATATTGATG CCAGTCGATT TCCAAAAATA GAGCCAAAGC GAGTCCCCCT AACCGACGAC
AGTCATGTCG CCATGAGTGT TAATCTTGAT GCGTGCATCC AGTGTAATTT GTGCGTACGA
GCATGTCGGG AGGTGCAGGT TAACGATGTT ATCGGCATGG CCAATCGAGG CCGAGATAGC
GCCATCATCT TCGATCAAAG TGATGAGATG GCAGAGTCTA GCTGCGTCGC CTGTGGTGAG
TGTGTGCAGG TATGTCCAAC CGATGCCCTA ATGCCAGCAT CTATTGCTAA CAATACCAAC
ATGACCTGTG AGCAATCAAT CGATAAAGCG GTCTCATCTG TATGTCCATT TTGTGGTGTT
GGGTGTCAGA TATCTTTGAA GGTAAAAGAT AATAAGGTTC AGTATGTCGA CGGATTAGAT
GGTCCAGCGA ATGAATCTCG TCTCTGTGTT AAAGGACGCT TTGGTTACGA TTATATCCAC
CATGCTCACC GACTAACTAA GCCGCTTATC AGACTCAAAG ATGCCCCCAA GGGGTTAAAT
GTTGACCCTG CTAATCCTCT TACTCACTTT AGAGAAGCCA GTTGGCAAGA GGCGATAGAG
GTCGCCGCCA AGGGGCTGTC AACACTTAAA AAAAATCATG GCGGTGAGAG TGTGGCGGGA
TTTGGCTCAG CCAAGTGCAC CAATGAAGAA GCTTACCTAT TCCAGAAATT AATTCGCCAA
GGTTTTGGCC ATAACAATGT CGATCACTGC ACTCGTTTGT GTCATGCCTC TTCTGTAGCG
GCCCTGATTG AAAATATTGG CTCAGGGGCC GTGACCGCCT CATTCAACGA GATAGAGCAC
GCTGATGTTG CTATCGTAAT AGGGTGTAAC CCCACAGAAA ATCACCCAGT CGCAGCCACT
TATTTTAAAC AGTTTGTGCG CCGAGGCGGC AAGTTAATCG TGATGGATCC TCGCGGCACA
GCCATGAAGC GTTTCGCCAC GCATATGCTG CAGTTTAGAC CCGGCACCGA TGTAGCTCTA
CTTAACGCCA TCATGCATAT CATTGTGGAT GAGGGGCTGC AAAACCAAGC CTATATCGAT
GAGCACACGG AAAACTGGCA AGCTCAGAAA GATCACCTTG TTGGCTTCTC GCCCGAAAAG
ATGGCACCTT TGTGCGGCAT AGATGCACAG ACACTTCGTC AGGTAGCACG CACCTTCGCT
AAAGGCAAAG CGGGCATGAT CTTCTGGGGC ATGGGGGTCA GTCAACATAT TCACGGTACC
GATAACTCTC GCTGCCTCAT CTCACTCGCC CTCATGTGTG GCCATGTGGG TCGTAGCGGC
AGTGGCTTGC ATCCTCTCAG GGGGCAAAAC AATGTCCAAG GCGCATCAGA TGCTGGCCTT
ATTCCCATGT TTCTCCCTGA CTATCAAACT GTGAAAGATA ACAATATCCG CGCACACTTT
GATGAGATCT GGCAAGAGGA GAGTGACGCG ATAGCGGTAT CAGCAACCCC AGGTCTCACA
GTGGTGGAGA TTATCGATGC CATCCATAAG GATATGATCC GCGGCATGTA CATTCTCGGT
GAAAACCCTG CGATGTCAGA CCCCGATGTT AGCCATGCGC GTAATGCATT AGCTAAACTG
GAGCACTTAA TCGTTCAGGA TATCTTCTTA ACCGAAACCG CCAGTTTCGC AGATGTTATC
TTCCCTGCCG CTGCCTTTGC CGAAAAAGAT GGCACTGTGA CCAATACCAA TCGTCAGGTG
CAGATGGGGA GAAAAGCGCT GGATGCGCCG GGAGAAGCCA AGCAAGATTG GGCGATACTG
ATTGAGCTTG CCAACGCCCT AGGGCTTAAC TGGCAATATC CTTCACCCCG CGAGATCTTC
AATGAGATGA AGCTGGGCAT GAGTTCATTA GACAATATTA GTTGGGAAAG GCTATCGAGT
GAAAACGCAG TCACTTACCC CTGTAATGGT GAAAACCAAC CCGGTGAAGC CATTGTATTT
GGTGATGGTT TTCCCCGCCA GAGTGGCCGA GCAAAGTTTA CCCCGGCCAG TGTTATTGCC
CCCGACGAAC TGCCGGATAA GGAGTACCCT TTGATTATGA CCACAGGTCG TCAATTGGAG
CATTGGCATA CGGGCAGTAT GACACGTCGC TCCAAAGTCT TAGATGCAGT AGAGCCTGAG
GCCAACTGCT CACTTCATCC CAAGACATTA AGGCGCTTAG GAATCTCGCC AGGTGGAATG
ATCCGCTTAC TCTCTCGCCG CGGTGAGATA GAGCTGCTCG CCCGCGCAGA TAGAGCTGTT
GCCGAAGATA TGGTATTTGT CCCCTTCGCT TATGTGGAAG CGGCGGCAAA TTTACTGACC
AACCCAGCAC TGGATCCCGT AGGAAAAATT CCAGAGTTTA AGTTTGCAGC CGTACGTGGA
GAAGCGGTTA ATTAG
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| Protein sequence | MDIKLHTIAF TLDDVEVTAS PDETLWQVAK RQGNKLPHLC FTDSSGYRPD GNCRACMVEI
EGERVLAASC LRKPTQGMVV HSQSSRATRS RKMVMELLLT DQPKQISDSG SHLSQMAQLQ
DIDASRFPKI EPKRVPLTDD SHVAMSVNLD ACIQCNLCVR ACREVQVNDV IGMANRGRDS
AIIFDQSDEM AESSCVACGE CVQVCPTDAL MPASIANNTN MTCEQSIDKA VSSVCPFCGV
GCQISLKVKD NKVQYVDGLD GPANESRLCV KGRFGYDYIH HAHRLTKPLI RLKDAPKGLN
VDPANPLTHF REASWQEAIE VAAKGLSTLK KNHGGESVAG FGSAKCTNEE AYLFQKLIRQ
GFGHNNVDHC TRLCHASSVA ALIENIGSGA VTASFNEIEH ADVAIVIGCN PTENHPVAAT
YFKQFVRRGG KLIVMDPRGT AMKRFATHML QFRPGTDVAL LNAIMHIIVD EGLQNQAYID
EHTENWQAQK DHLVGFSPEK MAPLCGIDAQ TLRQVARTFA KGKAGMIFWG MGVSQHIHGT
DNSRCLISLA LMCGHVGRSG SGLHPLRGQN NVQGASDAGL IPMFLPDYQT VKDNNIRAHF
DEIWQEESDA IAVSATPGLT VVEIIDAIHK DMIRGMYILG ENPAMSDPDV SHARNALAKL
EHLIVQDIFL TETASFADVI FPAAAFAEKD GTVTNTNRQV QMGRKALDAP GEAKQDWAIL
IELANALGLN WQYPSPREIF NEMKLGMSSL DNISWERLSS ENAVTYPCNG ENQPGEAIVF
GDGFPRQSGR AKFTPASVIA PDELPDKEYP LIMTTGRQLE HWHTGSMTRR SKVLDAVEPE
ANCSLHPKTL RRLGISPGGM IRLLSRRGEI ELLARADRAV AEDMVFVPFA YVEAAANLLT
NPALDPVGKI PEFKFAAVRG EAVN
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