| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3916 |
|---|
| Symbol | |
|---|
| ID | 6118265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4775336 |
|---|
| End bp | 4775824 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641635478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762269 |
|---|
| Protein GI | 170728243 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3542] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA AGTTATCTTT GGAAACTGCG GACTCATTTA TTGAGCATTT GAAATTAGAG
CAGCATGTCG AAGGGGGTTA TTTCCGTTCT TCATATCGCT CTGATGAGCA GTTTGATGAT
ACTCGGCCTC TTTGGACAAG TATCTACTTT CTGTTGCGCA CTGGGGAGGT ATCTAACTTT
CACCGCTTAA CAGCCGATGA GATGTGGTAT TTCCATGCAG GTCAATCGCT TACGATTTAC
ATGATTGATG AGGCTGGGGA GCTAACAACC GCTCAACTTG GATTAAATTT TGCTGCTGGT
GAACGGCCAC AATTTTTGGT GCCCAAAGGG TGTATTTTTG GTTCGGCCAT GAATAACCCT
GGTTTCTCAC TAGTAGGTTG CATGGTGTCA CCAGGCTTTA CGTTCGATGA TTTTGAGCTG
TTTAGCCAAG AGTGGCTACT GACTCAATAT CCTCAGCATA AAGAGGTTAT CACCCGCCTT
AGTCGTTAG
|
|---|
| Protein sequence | MTDKLSLETA DSFIEHLKLE QHVEGGYFRS SYRSDEQFDD TRPLWTSIYF LLRTGEVSNF
HRLTADEMWY FHAGQSLTIY MIDEAGELTT AQLGLNFAAG ERPQFLVPKG CIFGSAMNNP
GFSLVGCMVS PGFTFDDFEL FSQEWLLTQY PQHKEVITRL SR
|
|---|
| |