| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3903 |
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| Symbol | |
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| ID | 6118252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4755271 |
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| End bp | 4756449 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635465 |
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| Product | release factor H-coupled RctB family protein |
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| Protein accession | YP_001762256 |
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| Protein GI | 170728230 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03073] release factor H-coupled RctB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0221573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAT CCGTCCAAAA AATTACTGAA AACGTTAGCC TTATTGCATC TGCTGATACG
TGGATTGAAG GGCTAGCGAT ACAACAACTA ATCAAAACAT CTGAATTAAG TGGTATGCAC
CGTGTTGCGG GGATGCCTGA CTTGCATCCA GGCAGAGGCT ATCCAATAGG TGCAGCCTTT
TTTACAACTA ATAGGGTTTA CCCTGCACTT GTGGGTAATG ATATTGGTTG CGGTATGTCT
TTTTGGCAAA CGTCAGCCAA AGTATCCAAG GTTAGCTTAG ACAAATTTGC TAAGAAGTTT
GAGCATGTTG AGGAGTCATT GGATGACAGC TGGTCCGAAA CGATTGCGAG TCGTAAATGT
GCAAAAGGTA TAACGACTGA TAGTTATGAT CGTGCGTTAG GCACCATAGG GGGAGGTAAC
CACTTTGCGG AGTTTCAAGC CATTGACGAG GTTTATGATC AGGCTGCACT TGAATACTTA
GGATTAAATA AGAGGCAGTT ACAACTTCTT GTTCATTCAG GCTCAAGAGG CTTAGGTCAA
TCAATCTTGG TTGAGCACAT CTCAAAACAT AATCATAACG GCTTACTTGT TGAAGGGGCC
GACGTTGGTG ACAGTTTTCA AGACTACATA AGAAAACATG ATGAAGCTGT GCGGTGGGCT
GAGTTAAATC GTGAACTGAT AGCTTTGCGT TTTTTAGATT CGATCAGAGC AAAGGGAGAT
TGTGTTCTAG ATATTAATCA CAACCTAGTT TCGGCTCAAA ATATAGATGG CCGTGAAGGT
TGGCTTCATA GAAAAGGCGC AACACCAAGT GACAAAGGCT ATGTCGTTAT TCCCGGATCA
CGTGGTGATT ACAGCTATCT TGTAAAACCA TTATGCAGTA ACGGTGATGC TCTCAAAGTC
AGTCTGTTCT CATTAGCTCA TGGCGCTGGA AGAAAATGGA AACGTGGCGA GTGCCATGGG
CGGCTGGGTC ATAAATATAA GCGTGAAGAT CTCTATCGAA CAGCACTTGG AAGTCGAGTA
GTTTGTGGCA ATAAAGAGCT CTTGTATGAC GAAGCGCCAC AGGCGTACAA AAAGTGTGAA
ACTGTTATTA AGGATATGGT CGATGCGGGG TTGATTGAGT TGGTGGCAAA ACTACGACCT
GTTTTAACCT TTAAAACAAA TGGAGATTGT TCATCATGA
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| Protein sequence | MGKSVQKITE NVSLIASADT WIEGLAIQQL IKTSELSGMH RVAGMPDLHP GRGYPIGAAF
FTTNRVYPAL VGNDIGCGMS FWQTSAKVSK VSLDKFAKKF EHVEESLDDS WSETIASRKC
AKGITTDSYD RALGTIGGGN HFAEFQAIDE VYDQAALEYL GLNKRQLQLL VHSGSRGLGQ
SILVEHISKH NHNGLLVEGA DVGDSFQDYI RKHDEAVRWA ELNRELIALR FLDSIRAKGD
CVLDINHNLV SAQNIDGREG WLHRKGATPS DKGYVVIPGS RGDYSYLVKP LCSNGDALKV
SLFSLAHGAG RKWKRGECHG RLGHKYKRED LYRTALGSRV VCGNKELLYD EAPQAYKKCE
TVIKDMVDAG LIELVAKLRP VLTFKTNGDC SS
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