| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3889 |
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| Symbol | |
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| ID | 6118238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4740890 |
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| End bp | 4742119 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635451 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001762242 |
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| Protein GI | 170728216 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.169009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000210972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAAC ATTCGCTGGA CAAGGATAAG ATCAAGATCC TGCTTTTGGA AGGCGTCCAC
CAATCAGCGG TAGATGTATT CAAGCGTGCT GGTTACAGCA ACATCGAATA CCACAAGGCA
TCTCTTGGAG AAGAGGCACT CAAGGCATCG ATAAAGGATG CGCATTTTGT TGGCCTAAGA
TCACGGACTC AATTGACTGA AGCGGTATTA AGTCAGGCGG AGAAACTGGT CGGAATTGGT
TGTTTCTGTA TCGGTACTAA TCAGGTCGAT CTCAACTATG CTGAGAAACT CGGTGTGCCT
GTATTCAACG CGCCCTTCTC TAACACACGC AGTGTGGCAG AGCTGGTACT TGGCGAGATC
ATCATGCTAT TTCGTGGTAT TCCTCAGCGT AATGCCATGG CTCATCGTGG TGGTTGGCTT
AAGAGTGCAA CCGGTAGCTA TGAAGCCCGT GGCAAAACAC TCGGTGTGAT AGGTTATGGC
CATATTGGTA CTCAGTTAGG GATCCTAGCC GAGACCTTAG GTATGCGTGT CGTTTTCTTC
GATATCGAAG ATAAGCTACC ACTGGGCAAT GCCCAGCAGA TCCACTCGAT GCAGGAGCTG
ATGTCTCTTG CCGATGTGGT CAGTCTGCAT GTTCCTGAGA CCCCACAAAC CAAAGAGATG
ATCGGTGAAG CAGAGCTGGC TTGTATGAAA AAAGGCAGCA TCTTAATTAA CGCCTCTCGC
GGTACTGTGG TCGACATTGA CGCTCTAGCA TCAACGCTTA AAGCTGAAAA GATAGCTGGT
GCAGCCATCG ACGTTTTCCC TGTAGAGCCT AAGTCTAACG ATGATGAGTT TATTAGCCCG
CTACGTGGTC TAGACAACGT AATCTTAACC CCACATGTGG GCGGCAGCAC TCAGGAAGCA
CAGGAGAACA TAGGTATCGA GGTTGCTGGC AAGTTGGCCA AGTACTCTGA TAATGGATCA
ACCATGACCG CAGTGAACTT CCCTGAGGTA TCGTTGGCCC AGCATAAAGA TGCTTCACGT
CTGCTGCATA TTCACCACAA CCGCCCTGGC GTGTTGATCA AGATTAACCA AGCGTTTGCC
GAGAAAGGGA TCAATATCGC GGCCCAGTAT CTGCAAACAA CGGCTGAAAT TGGTTACGTT
GTGATGGAAG TGGATTCAGA CCAAGCCGAT GAAGCACTCG AGCAGATGAA GGCCATTGAA
GGCACTATTC GTACTCGTCT ACTTCACTAA
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| Protein sequence | MAKHSLDKDK IKILLLEGVH QSAVDVFKRA GYSNIEYHKA SLGEEALKAS IKDAHFVGLR
SRTQLTEAVL SQAEKLVGIG CFCIGTNQVD LNYAEKLGVP VFNAPFSNTR SVAELVLGEI
IMLFRGIPQR NAMAHRGGWL KSATGSYEAR GKTLGVIGYG HIGTQLGILA ETLGMRVVFF
DIEDKLPLGN AQQIHSMQEL MSLADVVSLH VPETPQTKEM IGEAELACMK KGSILINASR
GTVVDIDALA STLKAEKIAG AAIDVFPVEP KSNDDEFISP LRGLDNVILT PHVGGSTQEA
QENIGIEVAG KLAKYSDNGS TMTAVNFPEV SLAQHKDASR LLHIHHNRPG VLIKINQAFA
EKGINIAAQY LQTTAEIGYV VMEVDSDQAD EALEQMKAIE GTIRTRLLH
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